Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0539 ATGCTACGGTTCACTCTTCCGCTTCAGCTTCGTTGCCACCACCAACCTTCACTTACCAACCTTAGAACACCCAAACTCTTCAATCCACCCGTTCCATCGTTACCTCGAACCATTTCCAGGTTGCGAACCAGTTATCCGGTTCGCTCCGGTTCTGGTTCGCCTGTTTTTAAGTCACCGGAAGATGAATTGGACGTGGAGCTAGGCCGTCTGTTGGCGCTGTTGCCGGAGGAGATGCGGCGGAGAGTGAGCGAGCACCCGGAGCTGCATCAGTTGATGGAAGTGGTGATGGATTTGGGTCGGAAGCCGCTGGCTAGGTTTCCGTCCGGTGACTTTGTGATATCTGACTATCCTATAACGGTTGAGGATATTGGACATGCTACTGCTCAGGTTGGTGACTTTGCTGTTGACAATCGAGCAGGAATCAGTAGGACATTACATCGGATTAGTGCTATCAGAAATCGCAAGGGTGCAATTATAGGTCTAACTTGTCGAGTTGGCAGGGCAATTTCGGGAAGTGCTAAGTTGTTGCAAGATTTGGTTCAAGATGGGGCTTCTTTGTTGCTCATTGGGCCTCCAGGGGTAGGAAAAACTACAATTATCAGGGAAATAGCTCGTATGCTCGCAAATGATTACAAAAAGCGTGTGATGATTGTTGACACCTCCAATGAGATTGGTGGTGATGGTGATATACCTCATGCTGGAATAGGCAGTGCTCGACGTATGCAAGTCCCCAACTCAGATATGCAACATAAGGTATTGATAGAGGCAGTTGAAAACCACATGCCACAAGTGATTGTAATTGATGAAATTGGTACGAAACTTGAAGCAATGGCTGCGAGCACAATTGCACAACGTGGAATCCAGCTCGTTGCCACTGCTCATGGAGTCACAATTGAGAATCTGATAATGAATCCCTCACTAGAAATGCTTGTTGGAGGAATACAGAGCGTCACACTAGGGGATGAAGAGGCCAGCCGTAGGGGTGTCCAGAAGACAGTACTGGAAAGGAAAGGTCCGTCAACATTTAGTTGCGGAGTGGAGATTATTTCAAAGACAGAGTTGCGAATTCATCGTAGTCTTGAAGTAACTGTAGATGCTATTCTTTCTGGTCGCTTTCCAAATGTAGAAGTGCGCAAGATGAAGTCTCAAGGACAGGAAGAGATTTTGCAGAAGGAACCTGTTAATTACAGTTCTCTGGAAAAGAATGGGGAAACTATGTTTGAAGGTGCTCCAGAGGAGGAGGATGATCAGACCAGCCAAAATGAATCGCCGCCAAGATTGCGCGTTGATATGATAGAGGATTCCTGGGAACAAAGATCTCCACTTTCACTGTTTTGTTATGGGATTTTAGAGGCAACAGTTATGCAAGGGATTAAACATTTGAAAATGAATGATTTGTCCCTTCAATTGACTGATAATATTAGCGAGGCAAATGCTTTACTTGCATTGCAATCCAAGCTTAAGAAGAATCCAAAGATCCAAGCTGCTGCTAAATCTCATGATATTCCTATTTATGTTACGAAGACATGTTCCTTGGAGCAAGTAACAAAAGCCATACAAGCATTAGTAAGTGATCATGAAGATGGTTTAAAGGATTTTGTATCAATGGGTAGGATCAAACAATCAGAAAAGCTTGATGCTTTGGAGGAGGCAAGAATGGCTATAGAGCATATGGTAATTCCAAAAGGAGAAACAGTGGATCTACTCCCAAGGTCACCTTACATATTATCTCTTCAGCTGGACCTTGTTCGTAAATATCAGCTAGAAGCAAAGAGAATCAGTGGTGAGTCAGATGTACATCTACAAATCCTTCCATCCCATTACAAGACTGATGAAGAAGTAAAAACCAGTGAAGCTTCCGAGTTTGATGCTGTATTTGATGATTTTGCCTCTTCCAATGGCAGTGCCAATGGCTCTCCCTACACTTTGGACAAATTGCCCATACTGCCTGACTAG 1956 0.4438 MLRFTLPLQLRCHHQPSLTNLRTPKLFNPPVPSLPRTISRLRTSYPVRSGSGSPVFKSPEDELDVELGRLLALLPEEMRRRVSEHPELHQLMEVVMDLGRKPLARFPSGDFVISDYPITVEDIGHATAQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSAKLLQDLVQDGASLLLIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGSARRMQVPNSDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELRIHRSLEVTVDAILSGRFPNVEVRKMKSQGQEEILQKEPVNYSSLEKNGETMFEGAPEEEDDQTSQNESPPRLRVDMIEDSWEQRSPLSLFCYGILEATVMQGIKHLKMNDLSLQLTDNISEANALLALQSKLKKNPKIQAAAKSHDIPIYVTKTCSLEQVTKAIQALVSDHEDGLKDFVSMGRIKQSEKLDALEEARMAIEHMVIPKGETVDLLPRSPYILSLQLDLVRKYQLEAKRISGESDVHLQILPSHYKTDEEVKTSEASEFDAVFDDFASSNGSANGSPYTLDKLPILPD 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0539 651 PANTHER KINASE-RELATED 60 610 - -
Lal9g0539 651 Pfam Sporulation stage III, protein AA 161 312 IPR045735 -
Lal9g0539 651 CDD AAA 183 272 - -
Lal9g0539 651 CDD R3H_AAA 546 605 IPR034081 -
Lal9g0539 651 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 190 209 - -
Lal9g0539 651 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 550 568 - -
Lal9g0539 651 SMART AAA_5 182 313 IPR003593 -
Lal9g0539 651 MobiDBLite consensus disorder prediction 406 425 - -
Lal9g0539 651 Gene3D - 164 324 IPR027417 -
Lal9g0539 651 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 60 610 - -
Lal9g0539 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0539 Lal-Chr9 3638400 3646816 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0539 - - aprc:113864776 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0539 9 3638400 3646816 Lal9g0539 9 3638400 3646816 ECH