Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0535 ATGAGAAGCATTTCAAAGCCAATATACATCACTATCATTCTTATAGTACTAGTAGCAGTTCATGCAAAGGGGCGTGCCCTTGGTATAAGTGCTACTGAGTTGGTTTCTGATGGAGTGCATGATATTCAAAGTGAAAATTCTCACTTGCATCTCAAAGAGAGTGAGCCATGTGAGAATTACTGTGAGCAAATGTATGGTTTCTTGCCATGTTCCACTAACATTTTGGGTCACCTGTTTTTGATATTGGTATATGAGTACTTGTTATTCCATGGAGAGTCATACATGGCTTCTGGAAGTGAGAAAATCTTCGAGATTCTTGGCCCTGGTATTTTTGGTTCTAGTGCCTTTGATCTCCTTCGTGCCCTTCCTGAATCTTTAATTCTTCTTGTTACTGGACTCAACAGTGACAAAGAGACTGCACAAGAATATGCTTCCAGTGGCGTTGGATTGTTGGCTGGATCTTCCATTTTGCTTCTGACAGTAGTTTGGGGAACCTGTGTTATCATTGGAAGTCAAAATTTGAATGATGACCATAATCCTAGTGGATCTAACAGATCAAAATTATCAATAAAAGAATCACTCACTGGTTATGGCCTTACTATGGATATAGACACAGTGAATATGTCAAGAATCATGGTTTTCTCAATTATACCACTCCTTATAATGCAGATTCCCACTTTATTCAGCCTCTCTTCCACACCTCGAGCTGTAACCTTGATGGTTTCTCTTATCATTGCTGTCCTTTTTCTCATCTTCTACTTCGTATATCAGGTTTTTGAACCTCATATAGAGAAGAGAAGACTAGAATATATTAAACATGATCATTTAATATTAAGGATATTCCAACATGTTAACAAGCAAACTCTTCAAAAGATCCTTGCTGAGGATGGAACTGCTAATGTTGCAGCCATAAATGGTCTATATCATGAAATAAGTGGTGGGGAGGACTTGTTAGCTTCTGACATTAAAGAGATGCTGCTTCAGAACAAAGAAAATGGAGTAAACATCAAAGAGGAACAAATAGCAGACTTGTTAAGAATTTTTGATCGAAATGGCGACCAAGTCATATCCAAGGAAGAATTTGTGGATGGTTTGACAAATTATATTAACCAAACAAAGCGTGCCCTGGAGAAAAAGTACATAGCAAAAGAATCAATGAATAAGTTGTATAAGTCATTTATCAAGCCATGGATTGAACACACAAGAAGAGAGCTTAAATTGAAGGGACATATTATATCTGAAGTGTTAAACCATGCTCAGAGTGATATGGTTGGAAGTCTTTGTAAAGATGATGGCACACCTGATGAAGATGCAATAAGAAGATTATTTCATCAAGTTGATAAGGATGGTGATGGTCATGTCTCAAAGTCAGAGTTAAAAGTATTAGTGAAGGACATTAATCTTGGCGAGGTTGCAGATTCAGAAGAGGCAGTTACAAAAATTATTCATGAACTTGACCTTAACAGAGATGATGAAATCAATGAAAATGAATTCGTTGAAGTGTTTACAAATTGGATAAATAGAAATTCAAGTAAAGTTCCTCACTTAGTACCCATGCCTCATCAAAATCAAACCTGGGAAGAAGTTGAAAGCGTGGTAGAAGATAAGCGAATCAAAGGAATAAAAGCTTGGTTAAGCGCTTTAGGATATGTGATATTGGGAATTACTATGTTATCTCTTCTTGCAGAGCCCTTAGTGCATAGTGTTCAAAACTTCTCTGAAAAAGCAGGAATTTCATCCTTTTTCATCTCATTTATTGTTGTCCCTATTGCTACAAATTTTAGAGAAGCAACCACAGCAATAAGAGAAGCTAGCCATCAGAAGAGAGGCAATACCTCTCAAACAATTTATGAGATTTATGAATCAGTTTTCATGAATAATATTCTTGGATTTGTAGTGATCTCAAGTCTAATATATATGAGAAATATCACTTGGGAATTCTCAGCTGATGTATTGGTTGTGGCAATTGTATGTGCTGTGATGGGTATCACTGCAAGTTTTCGTTCCATTTTCCCTCTCTGGACATCTTTTCCTGCATATGCAATGTACCTTCTATCATTAGTTTTGATTTTTGTTCTCAAAGATTTTCTGCATTATGTTTAG 2103 0.3647 MRSISKPIYITIILIVLVAVHAKGRALGISATELVSDGVHDIQSENSHLHLKESEPCENYCEQMYGFLPCSTNILGHLFLILVYEYLLFHGESYMASGSEKIFEILGPGIFGSSAFDLLRALPESLILLVTGLNSDKETAQEYASSGVGLLAGSSILLLTVVWGTCVIIGSQNLNDDHNPSGSNRSKLSIKESLTGYGLTMDIDTVNMSRIMVFSIIPLLIMQIPTLFSLSSTPRAVTLMVSLIIAVLFLIFYFVYQVFEPHIEKRRLEYIKHDHLILRIFQHVNKQTLQKILAEDGTANVAAINGLYHEISGGEDLLASDIKEMLLQNKENGVNIKEEQIADLLRIFDRNGDQVISKEEFVDGLTNYINQTKRALEKKYIAKESMNKLYKSFIKPWIEHTRRELKLKGHIISEVLNHAQSDMVGSLCKDDGTPDEDAIRRLFHQVDKDGDGHVSKSELKVLVKDINLGEVADSEEAVTKIIHELDLNRDDEINENEFVEVFTNWINRNSSKVPHLVPMPHQNQTWEEVESVVEDKRIKGIKAWLSALGYVILGITMLSLLAEPLVHSVQNFSEKAGISSFFISFIVVPIATNFREATTAIREASHQKRGNTSQTIYEIYESVFMNNILGFVVISSLIYMRNITWEFSADVLVVAIVCAVMGITASFRSIFPLWTSFPAYAMYLLSLVLIFVLKDFLHYV 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0535 700 ProSiteProfiles EF-hand calcium-binding domain profile. 336 371 IPR002048 GO:0005509
Lal9g0535 700 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 10 383 - -
Lal9g0535 700 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 393 513 - -
Lal9g0535 700 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 543 698 - -
Lal9g0535 700 Gene3D - 375 515 - -
Lal9g0535 700 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Lal9g0535 700 Pfam EF-hand domain pair 333 366 IPR002048 GO:0005509
Lal9g0535 700 Pfam Sodium/calcium exchanger protein 548 691 IPR004837 GO:0016021|GO:0055085
Lal9g0535 700 Pfam Sodium/calcium exchanger protein 105 254 IPR004837 GO:0016021|GO:0055085
Lal9g0535 700 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 543 698 - -
Lal9g0535 700 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 393 513 - -
Lal9g0535 700 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 10 383 - -
Lal9g0535 700 SMART efh_1 340 368 IPR002048 GO:0005509
Lal9g0535 700 SMART efh_1 477 505 IPR002048 GO:0005509
Lal9g0535 700 SMART efh_1 438 466 IPR002048 GO:0005509
Lal9g0535 700 ProSitePatterns EF-hand calcium-binding domain. 447 459 IPR018247 -
Lal9g0535 700 CDD EFh 439 503 IPR002048 GO:0005509
Lal9g0535 700 Gene3D - 293 374 - -
Lal9g0535 700 ProSitePatterns EF-hand calcium-binding domain. 349 361 IPR018247 -
Lal9g0535 700 ProSiteProfiles EF-hand calcium-binding domain profile. 434 469 IPR002048 GO:0005509
Lal9g0535 700 SUPERFAMILY EF-hand 324 503 IPR011992 -
Lal9g0535 700 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Lal9g0535 700 Pfam EF-hand domain pair 437 502 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0535 Lal-Chr9 3591865 3595604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0535 389 699 EF-hand Containing Proteins AT1G53210 36.418 1.78e-58 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0535 - - gmx:100799062 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0535 9 3591865 3595604 Lal9g0535 9 3591865 3595604 ECH