Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0510 ATGAGTGGTCCTTCAAGTGATGGATTTATCCAAATGGGTGGAACCATAAGGCATAAGAGAAAATGCAGAGACATCACTTTTCTTGTGATCTTCATTGCATTTTCTATAGGAATGGTTGTTAACTCCAGCTTTGGTTTCAACCAAGGGAACCCACTAAGGCTTACTCACGGGCTGGACTACAAAGGGAATGTGTGTGGGGATAAGTTTGCATACTCTGGCCTTGGTGAATTGGAGCTCAGATATTGGCAAAATCCTAATCAGGTTTATCAGAGTGGATTGAAGGACAGCCAATTTAAACTGGCCAATGCCCGCAGTATATGTCTATTGGACTGCCCTATACCTTCTGACGATTCTCTTGTCTGGGTTTGTGATTATCCTGAAGGAGATATTAGTCTTTCGATGACTGATTGGATTAATAGGAAATACGATTATTTTGAGTTTCTGACACCAGAAATGAGAAACTCCTCTCTACAACTTCAGGGTCCATGTTATCCTGTCATATTTCCTAGTGTAAATGTTTACTGGAGTTGCCAATTTATTGCTCGAGCATCGAACATGTCTTTGAAGCATTGGCAGCAGATGGGTGGAGTTAACATATATGAAGACATTGTTATCGATAAGTCCATTCACAAGTCAATTAATTCTCGTTCAGCTGTCTTAAAGAGATACATGGCTGACATAGGAAAGGCATGGCCAGTACTCGTTGTCTGTGGAGGGATTCTACCTCTTTTTCTGTCTGTGGTTTGGTTGGTGATGATTCGCCATTTTGTTGCTGCAATGCCTTGGATAACAGTGGTGCTGTTTAATGTTCTAATAATATCAGTCACAATGTTCTACTACCTAAAAGCTGGATGGATGGGAAATGATGTCATTTCTCCCATCATTGGAGAGCACGACCCATACATTGATGTATCTGGGAGGGAGCTGACTCACTTACGCGTAGCTACTGTAGTTATGACCTTTATCATGTCTGTTGCCATCCTTTCATCAATTGCTATTGTTCGGCGCATCCTTAGAGCAACATCTGTTGCTGCAAAAGTGATAGGAGAAGTTAAAACACTCATTATTTTTCCACTCATACCATATGGCATCCTTGCTGTGTTTTACATGTTCTGGATTTCAGCTGCTCTCCACTTGTTCAGCACTGGCCAGATTGTTCAGAATGACTGCAACTCTAACTGCTGCACATATGACCTCCTGGCAAAACAGGTGAACTGTGACCGATGTTGTGGATACAGCATTCATCACACACCACATTTTAGGGTTGCCATCATTTTTCACCTATTTGGGTGTTATTGGGCTACACAATTTTTCATGGCATGCTCCTCAACAGTGATTGCCGGATCTGTTGCTTCTTATTACTGGGCCCATGGTGAAACATCTCCGGAAATTCCACGTCTCACAGTCTTTTCCTCCATGAAGAGGCTCATGCAGTACAGTCTTGGGTCTGTGGCGCTTGGCTCACTGATTGTGTCATTTGTAGAATCAATCCGCTTTCTACTTGAATCTATTCGTCGCAACCTAAAAGTCAATAGTTACGAGCCTGACAACTGTTTAGGCAAGGCTGCATACCAATCTTCTCAATGTTTTCTCAGGTGTATTGAGTGGATTATGAAATCAGCAAACCGGAATGCTTACATCATGATTGCTATAGCTGGCAAAAGTTTCTTTGCGGCCTCTTTTATTGCAACAGAGTTGATCATGAATAACATCCTGAAGATTGGGCGTCTCAATGTAATTGGAGATGTCATTCTGTTCCTTGGAAAACTATGTGTCAGTCTCTCGAGTGTTGTGTTTGCATTCCTCATGTTGGACACACACATGTACAAATCTGCCCATAACAAGATCTCGTCTCCGCTCTTGCCTGTTACAGTTTGCTGGGCTCTTGGTTATATCGTTGCAAGTCTTTTCTTTGCAGTTGTGGAGATGTCAATCGACACCATCGTTCTCTCATACTGCCAAGATTCTGAAGAACACCAAGGGACAGCCCATTATGCTCCACCCCTTCTCATTGAAACTCTCAGTGACCAAAATGAAGTGCAGAGACTTACACAAGGACCCCAATGA 2067 0.4253 MSGPSSDGFIQMGGTIRHKRKCRDITFLVIFIAFSIGMVVNSSFGFNQGNPLRLTHGLDYKGNVCGDKFAYSGLGELELRYWQNPNQVYQSGLKDSQFKLANARSICLLDCPIPSDDSLVWVCDYPEGDISLSMTDWINRKYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNMSLKHWQQMGGVNIYEDIVIDKSIHKSINSRSAVLKRYMADIGKAWPVLVVCGGILPLFLSVVWLVMIRHFVAAMPWITVVLFNVLIISVTMFYYLKAGWMGNDVISPIIGEHDPYIDVSGRELTHLRVATVVMTFIMSVAILSSIAIVRRILRATSVAAKVIGEVKTLIIFPLIPYGILAVFYMFWISAALHLFSTGQIVQNDCNSNCCTYDLLAKQVNCDRCCGYSIHHTPHFRVAIIFHLFGCYWATQFFMACSSTVIAGSVASYYWAHGETSPEIPRLTVFSSMKRLMQYSLGSVALGSLIVSFVESIRFLLESIRRNLKVNSYEPDNCLGKAAYQSSQCFLRCIEWIMKSANRNAYIMIAIAGKSFFAASFIATELIMNNILKIGRLNVIGDVILFLGKLCVSLSSVVFAFLMLDTHMYKSAHNKISSPLLPVTVCWALGYIVASLFFAVVEMSIDTIVLSYCQDSEEHQGTAHYAPPLLIETLSDQNEVQRLTQGPQ 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0510 688 Pfam Plasma-membrane choline transporter 316 657 IPR007603 GO:0022857|GO:0055085
Lal9g0510 688 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 4 685 - -
Lal9g0510 688 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 4 685 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0510 Lal-Chr9 3437104 3443368 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0510 K15377 - gmx:100803501 1228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0510 9 3437104 3443368 Lal9g0510 9 3437104 3443368 ECH