Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0466 ATGGCTCCCGTTGCTCCTCGATCTGGAGATGCAATATTCGCCAACGTCGAACGCGTGAACGCGGAACTGTTTACTTTAACATATGGTGCGATCGTGCGTCAATTGCTCACCGATCTGGAAGAAGTTGATGAGGTTAACAAGCAGCTTGATCAAATGGGTTATAATATTGGAATCCGTTTGATTGATGAGTTTTTAGCTAAATCTAATGTATCAAGATGCGTTGATTTCAGAGAGACCACTGATGTAATTGCGAAGGTTGGTTTTAAAATGTTCCTTGGTGTTACTGCATCTGTGACCAATTGGGATGCTGATGGGACATGTTGTAGTATTATTTTGGAGGATAATCCTTTGGTAGACTTTGTTGAGCTTCCTGACAACTGTCAAGGTCTGTACTATTGTAACATCCTAAGTGGAGTCATTAGAGGAGCCTTAGAGATGGTGTCAATGAAAACTGAGGTCACTTGGATCCGTGATGTGCTTCGGGGTGATGATGCATTTGAGTTGCAGGTAAAACTTCTCAAGCAAGTTCCAGAAGAGTATCCATACAAGGATGATGAGTGA 561 0.4225 MAPVAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRLIDEFLAKSNVSRCVDFRETTDVIAKVGFKMFLGVTASVTNWDADGTCCSIILEDNPLVDFVELPDNCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAFELQVKLLKQVPEEYPYKDDE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0466 186 PIRSF TRAPP_1_Bet3 3 185 IPR016721 GO:0030008|GO:0048193
Lal9g0466 186 PANTHER PROTEIN PARTICLE COMPLEX SUBUNIT, PUTATIVE-RELATED 1 186 - -
Lal9g0466 186 CDD TRAPPC3_bet3 20 174 IPR016721 GO:0030008|GO:0048193
Lal9g0466 186 SUPERFAMILY Ligand-binding domain in the NO signalling and Golgi transport 18 176 IPR024096 -
Lal9g0466 186 Coils Coil 32 52 - -
Lal9g0466 186 Pfam Transport protein particle (TRAPP) component 24 171 IPR007194 -
Lal9g0466 186 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 1 186 IPR016721 GO:0030008|GO:0048193
Lal9g0466 186 Gene3D Trafficking protein particle complex subunit 3 3 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0466 Lal-Chr9 3076759 3078957 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0466 K20302 - gmx:100306217 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0532 2 3200807 3203538 Lal9g0466 9 3076759 3078957 LSH