Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0409 ATGGCGGCGGTGGAAAATGAAAAAACTGGGTCAGATGGGAAAGTTTGGAACTTTTGTAAAATGCCATTTTGGGAAACAACTCATCCTTCTTCTTCTTCTTCATCTTCTTCTATTTCTTCAACGTTTTCTTCTATGCACGGTAGTGTTCATCAGCAAAGCCAGATTCTTCAGTCTCTTGATAGATCCACTCATCAATCTTCAACTACGGTTTCTTCCTTGGCTAAATCTCTTCTTCCTAAAAGGAGAAGACTCCGTCTTGATCCACCCAACAAGCTTTACTTTCCATATGAACCTGGTAAGCAAGTTAGGAGCGCCATCACAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCTCCCAAGAGTTGTTATATGCGCCCACCCAGTGGTGTTCTTGCACCTAGTGAAAGTGTAATTGCAACTGTGTTTAAGTTTGTGGAGCCGCCAGAGAAGAATGAGAAACCAATTGATCAGAAAAGCAGGGTTAAGTTTAAAATCATGAGCTTAAAAGTGAAAGGTGAAATGGATTATGCACCAGAACTGTTTGATGAGCAAAGGGATCAAGTATCGGTGGAGCAAATTCTGCGGGTTGTTTTCCTAGACCCTGAACACTCTAGCCCTGCCATGGATAAGCTTAAACGGCAGTTGGCTGAGGCTGAGGCCGCACTGGAAGCAAGAAAGAAGCCCCCAGAGGAGACAGGTCCTCGAATAGCTGGCGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGGTACCTGGCCAAGCAACAGGTTGAAGGGGTTCCATCAATGTAA 816 0.4326 MAAVENEKTGSDGKVWNFCKMPFWETTHPSSSSSSSSISSTFSSMHGSVHQQSQILQSLDRSTHQSSTTVSSLAKSLLPKRRRLRLDPPNKLYFPYEPGKQVRSAITIKNTCKSHVAFKFQTTAPKSCYMRPPSGVLAPSESVIATVFKFVEPPEKNEKPIDQKSRVKFKIMSLKVKGEMDYAPELFDEQRDQVSVEQILRVVFLDPEHSSPAMDKLKRQLAEAEAALEARKKPPEETGPRIAGEGLVIDEWKERRERYLAKQQVEGVPSM 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0409 271 ProSiteProfiles Major sperm protein (MSP) domain profile. 83 205 IPR000535 -
Lal9g0409 271 Pfam MSP (Major sperm protein) domain 84 194 IPR000535 -
Lal9g0409 271 MobiDBLite consensus disorder prediction 226 245 - -
Lal9g0409 271 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 38 269 - -
Lal9g0409 271 MobiDBLite consensus disorder prediction 53 74 - -
Lal9g0409 271 SUPERFAMILY PapD-like 72 212 IPR008962 -
Lal9g0409 271 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 38 269 IPR016763 GO:0005789
Lal9g0409 271 Gene3D Immunoglobulins 79 209 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0409 Lal-Chr9 2709227 2711949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0409 - - gmx:100820576 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0409 9 2709227 2711949 Lal9g0409 9 2709227 2711949 ECH
Lal2g0445 2 2694965 2698195 Lal9g0409 9 2709227 2711949 LSH