Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0395 ATGGCCCTAGTTAGTCCTATGTTGCTCAATTCCTCCTTCATTTCACTTACTGATTTAGGCAAAAATATAAAACCAGGAAGGCCTAGTCTCTTCGTGCATAGAATTGATTCCCCTATCCGATGCTTGGCAACCACAAATGTTTCTGAGAAAAAATCAGCCAATTACCAACCTAATATCTGGGATTACAATTTTTTGCAGTCCTTAAAGCATGATTATGCGGATATAAGATATGAGGACAGTTCCATGATGCTACAAGAGGAAGTGAGGAGAATGATCATTGATGAAAATATAGACATATGGACAACATTGGAGCTAATTGATGATGTTAAACGATTGGGTCTCAGCTACCATTTTGAAAAGGAGATAGCAAAAGTCCTTGACAGGTTTCTCTCTCTGGAAATATGTAATGTTAGAAGTACTCACATAAACCTCCATGAAGCTGCTTTAAGCTTTAGGCTCCTCAGAGAATATGGTTATGAAGTCTCAGCAGATATGTTTGAGAGATTCATGGATAATAATGGTAACTATAAGGCAAGCCTTGGCAAAGATGTTAAAGGAATGTTGAGTCTATATGAGGCTTCATTTCTGGGTTATGAAGGAGAAGAGATTCTGGATAAGGCAAAGACTTTTACTAGGTTCCATCTAAGGGTCCATATTGAAGATAGAAAGAGTGTTCAATTTGAAAAAGTGAGTCATGCATTGGAACTTCCCATGCATCATAGAATCCAAAGGATGGAAGCTCGGTGGTATATTGATGCATATGGCAGAAGAAAGGATGCAAATAGAGTGTTACTTGATGCGGCCAAATTAGATTTCAACGTTGTACAGTCTACACTGCAGAAGGATCTCCAAGAAATGTCACTGTGGTGGAAGGAGATGGGACTAGTACCAAAGTTAAGCTTTAGCAGGGACAGGCTAATGGAGTGTTTCTTTTGGACGGTTGGAATGGTCTTTGAACCTCACTCCAGTCATGTTCGCAAAGGTTTAACTAAAGTAACTTCCTTAATAACTACCATTGATGATGTTTATGATGTTTATGGCACCTTGGATGAACTAGAGCTTTTTACTTCAGCCGTGGAAAGTTGGGATATTAAATCAATTCAACTTCTTCCAGATTACATGAAGATATGCTTCCTAGCTCTTTACAACACTGTAAATGAATTAGCTTATGATATATTGAAAGACCAAGGACAATATATCCTTCCATACCTCACAAAAGCGTGGTCAGATATGTTGAAAGCATTCCTACAAGAAGCTAAGTGGTGTCGGGACAATAATGTACCAAAATTTAATGACTACCTCAACAATGCGTGGGTGTCAGTGTCTGGTGTAGTTATACTGATTCATGCATATTTCTTGTTAAATCACAACATCACTAAAGATGCACTTGTTTCCTTGGAGAATTACCATGATCTGCTACGTAGGCCATCCATTATTTTTCGCCTTTGCAATGATTTGGGTACTTCAATGAGTGAATTACAAAGAGGTGAAGTAGCAAACTCGATTGTATGCTACATGTGTGAAAATGGTGTTAGTTATGAGGGTGCTTATAAACATATTCACAGTTTGCTTGATGAAACTTGGAAAAAGTTGAACAAAGATGGAGTCACATGTTCTCCATTCCCAAAACCTTTCGTGGAAATAGTAATCAACCTTGCTAGAATGTCACGGTGCACATACCTTTATGGAGATGACCATGGTGCCCCAGATAATGCAGCAAAGAATAGAATTTGGTGCTTGATAATTGAACCCATTGCTGTCAAGGAGGCAAACATGTACACAAATGAAATGTGA 1794 0.3841 MALVSPMLLNSSFISLTDLGKNIKPGRPSLFVHRIDSPIRCLATTNVSEKKSANYQPNIWDYNFLQSLKHDYADIRYEDSSMMLQEEVRRMIIDENIDIWTTLELIDDVKRLGLSYHFEKEIAKVLDRFLSLEICNVRSTHINLHEAALSFRLLREYGYEVSADMFERFMDNNGNYKASLGKDVKGMLSLYEASFLGYEGEEILDKAKTFTRFHLRVHIEDRKSVQFEKVSHALELPMHHRIQRMEARWYIDAYGRRKDANRVLLDAAKLDFNVVQSTLQKDLQEMSLWWKEMGLVPKLSFSRDRLMECFFWTVGMVFEPHSSHVRKGLTKVTSLITTIDDVYDVYGTLDELELFTSAVESWDIKSIQLLPDYMKICFLALYNTVNELAYDILKDQGQYILPYLTKAWSDMLKAFLQEAKWCRDNNVPKFNDYLNNAWVSVSGVVILIHAYFLLNHNITKDALVSLENYHDLLRRPSIIFRLCNDLGTSMSELQRGEVANSIVCYMCENGVSYEGAYKHIHSLLDETWKKLNKDGVTCSPFPKPFVEIVINLARMSRCTYLYGDDHGAPDNAAKNRIWCLIIEPIAVKEANMYTNEM 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0395 597 SFLD Terpene Cyclase Like 1 C Terminal Domain 261 586 IPR034741 -
Lal9g0395 597 PANTHER OS04G0344100 PROTEIN-RELATED 44 586 - -
Lal9g0395 597 CDD Terpene_cyclase_plant_C1 51 584 IPR044814 GO:0010333|GO:0016102
Lal9g0395 597 SFLD Isoprenoid Synthase Type I 261 586 - -
Lal9g0395 597 Gene3D Farnesyl Diphosphate Synthase 57 575 IPR008949 -
Lal9g0395 597 Pfam Terpene synthase, N-terminal domain 59 234 IPR001906 GO:0010333|GO:0016829
Lal9g0395 597 SUPERFAMILY Terpenoid synthases 261 585 IPR008949 -
Lal9g0395 597 Gene3D - 97 260 IPR036965 GO:0010333|GO:0016829
Lal9g0395 597 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 56 259 IPR008930 -
Lal9g0395 597 Pfam Terpene synthase family, metal binding domain 266 530 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lal9g0395 597 PANTHER TERPENE SYNTHASE 12-RELATED 44 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0395 Lal-Chr9 2621654 2625063 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0395 K12742 K19968 gmx:100814880 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0395 9 2621654 2625063 Lal9g0395 9 2621654 2625063 ECH