Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0391 ATGCTATCTGTGTTATATGAACAGACAATGGAAGAAGAAGCCGTGTTTGAAGCTGAAGTGGCAGAGGTGCAAGCATGGTGGAACTCCGAGAGGTTCAAGCTAACCCAAAGATCATACTCAGCTAGAGATGTGGTGTCCCTCCGCGGCAACCTGAGACAAACCTATGGCTCAAATGAGATGGCTAAGAAGCTATGGAGAACTCTCAAGACCCACCAAGCCAATGGCACAGCCTCAAGGACATTCGGTGCACTTGACCCTGTTCAGGTCACCCAAATGGCTAAGCACTTGGACACAATTTATGTCTCTGGGTGGCAGTGCTCATCCACTCACACCTCCACCAATGAACCTGGTCCAGACCTTGCTGATTACCCTTATGACACTGTCCCTAACAAGGTTGAACACCTTTTCTTTGCTCAGCAATACCATGACAGGAAACAAAGAGAGGAGAGAATGAGAATGAGCCGGGAAGAGAGGGCAAAAACCCCTTACATTGATTACTTGAGGCCGATCATAGCCGACGGTGATACTGGCTTTGGTGGCACCACAGCAACTGTTAAGCTTTGTAAGCTCTTCGTGGAGCGTGGAGCAGCCGGTATCCACATTGAGGACCAGTCTTCCGTGACCAAAAAATGTGGCCACATGGCAGGGAAAGTGCTTGTTGCAATAAGTGAACACATCAATAGGCTTGTGGCTGCAAGGTTGCAATTTGATGTCATGGGTGTTGAAACTGTTTTGGTGGCCAGAACAGATGCTGAAGCTGCAACTCTCATTCAGTCTAATATTGACACAAGGGATCATCAATTTATCTTGGGTGTGACCAACCCAAGCCTCAAGGGGAAGAGTTTAGCAACTCTTATGGCACAAGGCTTGGCTGCAGGAAAGAGCGGTGCTGAGCTTCAGGCCTTGGAGGAGCAATGGCTATCAATGGCACAATTGAAGACTTTCTCAGAAGCAGTAGTGGATGCAATTAAGAGCCAGAACATTAATGAAGAAGAGAAAAGGAGGAGGTTGAATGAGTGGATGAATTGTTCAAGTTATGAAAAGTGTCTTTCCAACAACAACGGAAGAGAGATTGCGGAAAGGTTTGGAGTAAGAGACCTTTTCTGGGATTGGGACTTGCCTAGAACTAGAGAAGGGTTTTATAGGTTCAAAGGGTCAGTGACAGCTTCAATTGTTAGAGGGTGGGCTTTTGCTCCACATGCTGATCTTATATGGATGGAAACTGCAAGTCCTAAGGTGGTGGAGTGCACACAATTTGCTGAGGGGGTTAGATCAAAGTACCCAGAGATTATGCTTGGATACAATCTTTCTCCATCATTCAACTGGGATGCTTCTGGCATGAATGATGAACAAATGAGAGACTTCATTCCTAGAATTGCAAGGTTGGGGTATGTGTGGCAGTTCATAACAGTGGGTGGCCTACACTGTAATGCACTTATCACCTCAACTTTTGCAAGTGATTTTGCAAATAGGGGAATGCTGGCTTATGTGGAAAGGATTCAGAGAGAGGAGAGGAACAATGGGGTTGACACACTTGCTCACCAGAAATGGGCTGGTGCTAACTACTATGACAGGTACCTCAAGACTGTGCAGGGTGGTGTTGCATCAACTGCTGCAATGGGAAAAGGCAACCACTTTTTACTACAAAAGCCTTCTGGAGTAACTGAAGAGCAATTTAAAGAAACATGGACTAGGCCAGGAACTGTAGGCATTGGTGGAGGCAGTGTGGTGGTTGCTAAGGCCAGAATATACACCAATTACTGGGATCAGAATACAAAGAATTTGATAGTTTCCGCCATGATGACTGTTCCACCCCAGTATCTGGATCAGTCAAGCACCGGACAACTCATTGGGCCACTACTCATCATTGGGCAAATTAGATCTAGCCTACGTGGTTGTCGATCACGTCCTGATAACCGACCTAACTTAGGGAAACGAGCACGACACCAATAA 1953 0.4634 MLSVLYEQTMEEEAVFEAEVAEVQAWWNSERFKLTQRSYSARDVVSLRGNLRQTYGSNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREERMRMSREERAKTPYIDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQSNIDTRDHQFILGVTNPSLKGKSLATLMAQGLAAGKSGAELQALEEQWLSMAQLKTFSEAVVDAIKSQNINEEEKRRRLNEWMNCSSYEKCLSNNNGREIAERFGVRDLFWDWDLPRTREGFYRFKGSVTASIVRGWAFAPHADLIWMETASPKVVECTQFAEGVRSKYPEIMLGYNLSPSFNWDASGMNDEQMRDFIPRIARLGYVWQFITVGGLHCNALITSTFASDFANRGMLAYVERIQREERNNGVDTLAHQKWAGANYYDRYLKTVQGGVASTAAMGKGNHFLLQKPSGVTEEQFKETWTRPGTVGIGGGSVVVAKARIYTNYWDQNTKNLIVSAMMTVPPQYLDQSSTGQLIGPLLIIGQIRSSLRGCRSRPDNRPNLGKRARHQ 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0391 650 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 9 533 IPR015813 GO:0003824
Lal9g0391 650 ProSitePatterns Isocitrate lyase signature. 209 214 IPR018523 GO:0003824
Lal9g0391 650 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 10 544 IPR006254 GO:0004451|GO:0019752
Lal9g0391 650 TIGRFAM isocit_lyase: isocitrate lyase 20 543 IPR006254 GO:0004451|GO:0019752
Lal9g0391 650 Gene3D - 260 375 - -
Lal9g0391 650 Gene3D - 16 533 IPR040442 -
Lal9g0391 650 Pfam Isocitrate lyase family 19 543 IPR006254 GO:0004451|GO:0019752
Lal9g0391 650 PIRSF ICL 366 547 IPR006254 GO:0004451|GO:0019752
Lal9g0391 650 PIRSF ICL 8 329 IPR006254 GO:0004451|GO:0019752
Lal9g0391 650 CDD ICL_PEPM 71 255 IPR039556 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0391 Lal-Chr9 2594848 2597439 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0391 K01637 - gmx:100782793 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0391 9 2594848 2597439 Lal9g0391 9 2594848 2597439 ECH
Lal2g0419 2 2508729 2509449 Lal9g0391 9 2594848 2597439 LSH