Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0378 ATGTCTTCCCTCCTCAGATCTAATAAGCCCAAACTTTTTTCTTCCTCTCTTTCTAGAACCTTCTCTTCTCTTCCCACTTCTACCCCTCGGATCAAACCCCTCCCTCCCGCCACCGAAATCTTCCACCGCAACACCGCTACGCTCTCTCGCGAGAATGAAAATCTTTCCAAGGGAAACCTGACTGGCGAGTTTGGAAAGTTCAACAGTGTCCCTTCTCTCAACAATCCCATCGCTATGCTTCCAAGTGATTCTATTGATAAGATCAATAATCCTCTGAGATACAAGGCTTCTGGACAGAATACCACTGTGCTGGCTGGAGCTGGATATGTTATTGGAAGTTCCAGAGTCTGGGCTACCAAGAGTCCAATGCTACTGGGAGCCAATGCTGTGATGGGTAGAAATCTTGAGAGAAGTGTGGATACTAACACATTAGGATTGACCGGTCATAAACGCTTTATGAGTGACACCACAGGTACAATCAGTGAGACAAAGACATATGGCCTTCGACCGTTATCTCCTCATCTTCCTCTTTATCAGCCACAGCTATCTTCAACTCTTTCAATTTTCAATAGAATCTCTGGAGCCCTCTTATCCACTGTCATATTGCTTTTTTATATGATATACATGAAAATGGGTTTGATCAGCCTCAGCTATGATTCGTTCTACCAGTTCTTGTTTTATTCATCAAAACTCAATCTACTTGCTGTTGAGTTATCTGGCTTAGCTCTTTCCTATCATCTGTATGCTGGAATTCGTCATTTAGTTGTCCACAAAATTGGTCTGGCAACGTCAGCAAGGAGTGGAAATAGATAG 813 0.433 MSSLLRSNKPKLFSSSLSRTFSSLPTSTPRIKPLPPATEIFHRNTATLSRENENLSKGNLTGEFGKFNSVPSLNNPIAMLPSDSIDKINNPLRYKASGQNTTVLAGAGYVIGSSRVWATKSPMLLGANAVMGRNLERSVDTNTLGLTGHKRFMSDTTGTISETKTYGLRPLSPHLPLYQPQLSSTLSIFNRISGALLSTVILLFYMIYMKMGLISLSYDSFYQFLFYSSKLNLLAVELSGLALSYHLYAGIRHLVVHKIGLATSARSGNR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0378 270 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 169 263 IPR000701 GO:0016627
Lal9g0378 270 Gene3D Aconitase, domain 4 35 147 IPR015928 -
Lal9g0378 270 TIGRFAM succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 169 262 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Lal9g0378 270 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 154 267 IPR034804 GO:0016020
Lal9g0378 270 SUPERFAMILY LeuD/IlvD-like 55 138 - -
Lal9g0378 270 Pfam Aconitase C-terminal domain 86 143 IPR000573 -
Lal9g0378 270 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 163 256 IPR034804 GO:0016020
Lal9g0378 270 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 154 256 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Lal9g0378 270 CDD SQR_TypeC_SdhC 169 255 - -
Lal9g0378 270 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL 154 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0378 Lal-Chr9 2515745 2521671 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0378 K00236 K03885 gmx:100527396 271.937