Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0376 ATGGCCGAACCCAAAGTTAAATACGATCGCCAACTCAGAATATGGGGTGACCAAGGGCAGGCAGCACTTGAGAAATCTAGCATATGCTTACTTAACTGTGGTCCTACCGGATCTGAAACACTTAAGAATCTTGTTCTCGGTGGAGTTGGAAGCATCACTGTGGTTGATGGGTCTAAAGTTGAAGTTGGTGACCTTGGAAACAATTTTATGGTGGATGAATCAAGCCTTGGGCAGTCAAAGGCAAAATGCGTATGCTCATTTCTCCAAGAGTTGAACGATGCTGTTAAAGCAAAATTTGTAGAAGAGTATCCAGAAACATTGATTGAGACAAATCCATCATTCTTTTCTCAGTTTACTTTGGTTGTTGCCACACAGCTGGTGGAAAGTTCAATGATAAAGCTCGATCAGATCTGCAGGGAGTCGAATGTTATGTTGATCTTTGCTCGCTCCTATGGCCTTGCAGGGTTTGTTCGAATTAGTTTAAAGGAACATACTGTAATAGAGTCAAAACCTGATCATTTCTTGGATGACCTCCGGTTAAATAATCCTTGGCCTGAACTCAAGAGGTTAGCAGAAGGCTTTGACTTGAATGTGCAAGATCCTGTGGCTCATAAGCACATACCATATGTTGTCATTCTTGTTAAGATGGCTGATGAGTGGGCCAAAAGTCATGATGGTAGCCTTCCATCAACAAGAGAAGAAAAAAGAGAGTTCAAGGAGCTTCTTAAGGCCGGGATGGTTGCACAAGATGAAGATAATTACAAAGAAGCTATTGATGCCTCATTCAAAGTATTTGCTCCTCAAGGAATTAGTTCAGAATTGCAACAGATACTCAATGATAATTCTGCTGAAGTGGACTCTAGCTCATCAGATTTTTGGGTGTTGGTGGCAGCTCTGAAGGAATTCATTGCAAATGAAGGTGGTGGGGAGGCGCCTCTTGAAGGCTCTATACCAGATATGACTTCTTCTACTGAGCAATATGTGAATTTGCAGAATATTTATCAAGCTAAGGCTGAGGCTGACTTTCTTGTAATGGAACGCTTGGTAAGAAATAGTTTGAAGAAAATTGGCAGAGATCCAAATAGCATTCCAAAGGCAACAATTAAAAGCTTCTGTAAGAATGCAAGAAAGCTCAAAGTTTGCAGGTACCGTCCGATTGAAGATGAATTTAATTCTCCAAATCTACCCGAGTTACAGAAGTTACTAATTGATGAGGATTACAGCATTGCTGTGGGGATTTATATTTTGGTTCGTGCTGTTGACCGGTTTGCTGCTAATTACAACACTTTTCCTGGACAGTTTGACAGTGCAATGGATGAAGATATCCCTAGATTGAAAAGCACAGCTATTGGCCTACTTAGTGACTTGGGATGCAACGGTGCCACTTTGGCTGAAGACCTTATTAATGAGATGTGTCGATTTGGTGCTGCAGAGCTTCATGCTGTTGCTGCTTTGGTAGGAGGAATTGCATCGCAGGAAGTGATCAAGCTCATAACAAGGCAATTTGTACCAATGTCCGGGACCTACATCTTCAACGGCATTGACCATAAGTCACAGCTGTTGTCATTGTAA 1572 0.4173 MAEPKVKYDRQLRIWGDQGQAALEKSSICLLNCGPTGSETLKNLVLGGVGSITVVDGSKVEVGDLGNNFMVDESSLGQSKAKCVCSFLQELNDAVKAKFVEEYPETLIETNPSFFSQFTLVVATQLVESSMIKLDQICRESNVMLIFARSYGLAGFVRISLKEHTVIESKPDHFLDDLRLNNPWPELKRLAEGFDLNVQDPVAHKHIPYVVILVKMADEWAKSHDGSLPSTREEKREFKELLKAGMVAQDEDNYKEAIDASFKVFAPQGISSELQQILNDNSAEVDSSSSDFWVLVAALKEFIANEGGGEAPLEGSIPDMTSSTEQYVNLQNIYQAKAEADFLVMERLVRNSLKKIGRDPNSIPKATIKSFCKNARKLKVCRYRPIEDEFNSPNLPELQKLLIDEDYSIAVGIYILVRAVDRFAANYNTFPGQFDSAMDEDIPRLKSTAIGLLSDLGCNGATLAEDLINEMCRFGAAELHAVAALVGGIASQEVIKLITRQFVPMSGTYIFNGIDHKSQLLSL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0376 523 Pfam ThiF family 8 501 IPR000594 -
Lal9g0376 523 Gene3D - 124 277 - -
Lal9g0376 523 Gene3D - 357 523 - -
Lal9g0376 523 Gene3D - 2 122 IPR042449 -
Lal9g0376 523 PIRSF APP-BP1 1 523 IPR030667 GO:0019781|GO:0045116
Lal9g0376 523 CDD APPBP1_RUB 7 521 - -
Lal9g0376 523 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT AXR1 2 523 - -
Lal9g0376 523 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 523 IPR045886 -
Lal9g0376 523 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 519 IPR035985 GO:0008641
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0376 Lal-Chr9 2499483 2505600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0376 7 78 EF-hand Containing Proteins AT2G30110 33.766 2.21e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0376 K04532 - gmx:100793799 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0376 9 2499483 2505600 Lal9g0376 9 2499483 2505600 ECH