Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0326 ATGGTTCATGAAATGAGGTCACATGTCCATGCATCTGGGGAAGAAGAGAAGGTGATAATGACAAGGAAGCAAAAAGCTGAGTCCAAAACACAAGAAGTAGAACATTCTCCTAAGAAGGCTAAGGTGGAAAATGAGGATGATGGCCACACCAATGGAAAACATGCACCTGATGATGTCTCTGTTGAATATGATGAATTCTGTAAAGCCATAAACGAGCACCTCTCTGTTGACCAGTTGAAAGAAATTCTTGAGGCTAATGGTCTTCATTCCTCTGGATCTGATCTTGAATTCAGACGAAGATGCCAAGACTTGTTGTTTTATGGTGCATTAGAGAAATGCCCGGTTTGCAATGGAAGTTTGGAATTTGATGGCAGAATTTTCTCTTGCAAAGGGTTCTACAGTGAGTGGGCTAGTTGCACTTTCAGCACCAGAGACCCTCCAAGGAAAGAGGAACCTATTAACATACCAGATTCTGTTCAGAACTCTCTAGTTTCAGATTTGTTAAAGAAATATCAGGACCCAAGCAAAAGGCCTCAGATGAATGTAAGCTTATTAGCAGACAAACCATTTACTGGGATGATGATATCATTGATGGGTCGTCTAACTCGGACACATCACTATTGGAAAAGGACTATTGAAAAGCATGGAGGGATGGTGGCAAACTCTATAATTGGGGCAACTTGTTTGGTGGCTTCACCTGCTGAGCGAGATCGTGGTGGAACATCCAAACTTGCAGAAGCCATGGAAAGGGGTATACCTGTGGTGAGGGAGGCATGGTTGATTGACAGCATTGAAAAGCAAGAACCTCAACCTTTGGAAGCATATGATCTTGTCTCTGATCTTTCTGAAGCAGGCAAGGGAATTCCCTGGGACAAACAAGATCCTAGAGAGGAGGCCATTGAATCTCTCTCAGCAGAACTCAAGCTTTATGGGAAGAGAGGGGTCTATAAAGACACCAAATTGCAGGAACAAGGTGGAAAGATATTTGAAAAAGATGGGATATTATACAACTGTGCCTTCTCTCTTTGTGACCAAGGGCGAGGACTGAATGACTACTGTGTCATGCAACTGATTGTTGTCCCAGAGAACCGTTTGCATCTGTACTTCAAAAAAGGAAGAGTTGGTGATGATCCAAATGCAGAGGAGAGATTAGAAGAGTTAGATAATGAGGACAATGCTGTCAAAGAGTTTGTCAGGCTCTTTGAGGAAGTAACTGGAAATGAGTTTGAGCCTTGGGAAAGGGAGAAGAAGTTCCAAAAGAGGCCATTGAAGTTTTACCCCATTGACATGGATGATGGATTTGAAGTTAGACATGGGGCACTAGGTCTTCGGCAGCTCGGGATAGCAGCAACACACTGTAAACTTGAGCCTCAGGTTGCAAATTTTATGAAGGTTATGTGCAGCCAAGAAATATATAAGCATGGTTACAAATCTTCACCTGAAAAGATGTATGCAAATGGCAGAAACTTTCTTTTTCCTATTTCTATAATATCTTCTTCAAAGGCTGATGACAATAGAACCCCATCAGGTGAGGAAGTTCTCTTGGAATTCATAGAGAAGGTGAAGTCATTGAAAGAGACTGGACCAAAGGCTGAGGCTGTGTGGACTGATTTTAGCCAAAGATGGTTCACCTTGATGCATTCCACAAGGCCTTTCATATTTAGAGACTATCAGGAGATTGCAGAACATGCTGCTGCTGCCCTTGAAGGTGTTAGGGACATAACTGTGGCTTCTCACCTCATTGGAGATATGAGTGGCTCTACCATTGATGACCCATTATCAGAATCATACAACAAATTGGGTTGCTCCATTTCTCCCTTGGACAAAGATTCAGATGATTATGATATGATTGTGAAATATCTTGAGAAAACTTATGATCCTGTCAAAGTTGGAGACTTGGAATATGGAGTGTCTGTTCAAAACATTTTTGTTGTTGAGTCAAGTGCTTTCCCTCCCTATGAAGAAATACAAAAGCTGCCAAACAAGGTTCTTTTGTGGTGTGGATCACGAAGCTCAAATCTTTTGAGGCACTTGCACAAAGGATTCTTGCCAGCAATATGCTCACTACCAGTTCCAGGTTATATGTTTGGCAAAGCTATTGTTTGCTCTGATGCTGCAGCCGAGGCTGCAAGATATGGTTTCACTGCTCTGGATAGGCCAGAAGGGTTCTTGGTTTTGGCCATTGCTTCTCTAGGAAATGAGATCACTCAATTGAAAAGCCCACCTGAGGACACAACATCCTTGGAAGAAAAGAAGGTTGGAGTGAAGGGGCTGGGAAAGAAGAAAACAAATGAATCAGAGCACTTTGTTTGGAAAGATGACATAAAAGTTCCTTGTGGTCAAATAGTTGCATCAGAGCATCAAGATAGCCCCCTAGAATACAATGAGTATGCTGTCTATGATCCTAAGCAGGTACGCATAAGCTTTTTGGTGGCAGTGAAGTATGAAGAGAAGGATGTGGAGTTTGATACAGTAGAAGGAAAGGGCCAAGAATGA 2496 0.4231 MVHEMRSHVHASGEEEKVIMTRKQKAESKTQEVEHSPKKAKVENEDDGHTNGKHAPDDVSVEYDEFCKAINEHLSVDQLKEILEANGLHSSGSDLEFRRRCQDLLFYGALEKCPVCNGSLEFDGRIFSCKGFYSEWASCTFSTRDPPRKEEPINIPDSVQNSLVSDLLKKYQDPSKRPQMNVSLLADKPFTGMMISLMGRLTRTHHYWKRTIEKHGGMVANSIIGATCLVASPAERDRGGTSKLAEAMERGIPVVREAWLIDSIEKQEPQPLEAYDLVSDLSEAGKGIPWDKQDPREEAIESLSAELKLYGKRGVYKDTKLQEQGGKIFEKDGILYNCAFSLCDQGRGLNDYCVMQLIVVPENRLHLYFKKGRVGDDPNAEERLEELDNEDNAVKEFVRLFEEVTGNEFEPWEREKKFQKRPLKFYPIDMDDGFEVRHGALGLRQLGIAATHCKLEPQVANFMKVMCSQEIYKHGYKSSPEKMYANGRNFLFPISIISSSKADDNRTPSGEEVLLEFIEKVKSLKETGPKAEAVWTDFSQRWFTLMHSTRPFIFRDYQEIAEHAAAALEGVRDITVASHLIGDMSGSTIDDPLSESYNKLGCSISPLDKDSDDYDMIVKYLEKTYDPVKVGDLEYGVSVQNIFVVESSAFPPYEEIQKLPNKVLLWCGSRSSNLLRHLHKGFLPAICSLPVPGYMFGKAIVCSDAAAEAARYGFTALDRPEGFLVLAIASLGNEITQLKSPPEDTTSLEEKKVGVKGLGKKKTNESEHFVWKDDIKVPCGQIVASEHQDSPLEYNEYAVYDPKQVRISFLVAVKYEEKDVEFDTVEGKGQE 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0326 831 Pfam Poly(ADP-ribose) polymerase, regulatory domain 453 597 IPR004102 GO:0003950
Lal9g0326 831 MobiDBLite consensus disorder prediction 1 57 - -
Lal9g0326 831 Gene3D - 57 178 - -
Lal9g0326 831 ProSiteProfiles BRCT domain profile. 185 277 IPR001357 -
Lal9g0326 831 Pfam WGR domain 336 415 IPR008893 -
Lal9g0326 831 PANTHER POLY [ADP-RIBOSE] POLYMERASE 2 819 - -
Lal9g0326 831 Pfam PADR1 (NUC008) domain 99 149 IPR012982 -
Lal9g0326 831 ProSiteProfiles PARP alpha-helical domain profile. 452 582 IPR004102 GO:0003950
Lal9g0326 831 ProSiteProfiles WGR domain profile. 325 425 IPR008893 -
Lal9g0326 831 Gene3D - 448 600 IPR036616 GO:0003950
Lal9g0326 831 SMART WGR_cls 336 419 IPR008893 -
Lal9g0326 831 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 452 601 IPR036616 GO:0003950
Lal9g0326 831 SUPERFAMILY ADP-ribosylation 600 818 - -
Lal9g0326 831 CDD WGR_PARP1_like 326 432 - -
Lal9g0326 831 Gene3D - 601 817 - -
Lal9g0326 831 SUPERFAMILY WGR domain-like 301 430 IPR036930 -
Lal9g0326 831 Gene3D BRCT domain 183 286 IPR036420 -
Lal9g0326 831 PANTHER DNA LIGASE 2 819 - -
Lal9g0326 831 Pfam BRCA1 C Terminus (BRCT) domain 188 264 IPR001357 -
Lal9g0326 831 Pfam Poly(ADP-ribose) polymerase catalytic domain 611 814 IPR012317 GO:0003950
Lal9g0326 831 ProSiteProfiles SAP motif profile. 71 105 IPR003034 -
Lal9g0326 831 SUPERFAMILY BRCT domain 188 289 IPR036420 -
Lal9g0326 831 SMART BRCT_7 187 267 IPR001357 -
Lal9g0326 831 SMART PADR1_2 97 150 IPR012982 -
Lal9g0326 831 CDD BRCT_PARP1 190 265 - -
Lal9g0326 831 ProSiteProfiles PARP catalytic domain profile. 591 822 IPR012317 GO:0003950
Lal9g0326 831 CDD parp_like 452 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0326 Lal-Chr9 2172220 2176312 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0326 K10798 - gmx:548024 1349.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0326 9 2172220 2176312 Lal9g0326 9 2172220 2176312 ECH