Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0309 ATGGTAGAATCACAACCCAAGTTTTTCATACCAGAGGCAATTCATGGTGTGAGTACTGATCTATCTGGACAGGTTCAGATGATATGGGATGTGATAAAAGCACCATTGATAGTGCCTATGCTGAATGCTGGAGTAGTCATATGTCTAGTCATGGCCCTTATGCTCTTCTTTGAGAGGCTCTACATGGGTATTGTCATTGTCCTTGTTAAGCTCTTTTGGAAGAAACCAGATAAAAGATACAAGTTTGAGCCAATCCAAGATGATGTTGAAGTGGGTAGTTCCAATTACCCTGTTGTTCTGATTCAAATTCCGATGTTTAATGAAAAAGAGGTGTACAAGGTGTCCATTGGAGCAGCTTGTGGCCTTTCATGGCCTTCAGACCGTCTCGTGATCCAAGTCCTAGATGATTCTACTGACCCTGTCATTAAGCAATTGGTGGAGATGGAATGTCAAAGATGGGCAAGTAAAGGTCTAAACATAACGTACCAAATAAGAGAGAATAGAACAGGTTACAAAGCAGGTGCCTTAAAAGAAGGACTAAAACGTAGCTATGTGAAACACTGTGAGTACGTGGCTATATTTGATGCAGATTTCAAGCCAGAGCCAGATTTTCTGAGGCGTGCTATTCCCTTCTTAGTTGGAAATCCTGACATTGCTCTTGTTCAAGCTCGATGGAGATTTGTGAATTCGGATGAGTGTTTGTTAACAAGAATGCAAGAGATGTCACTGGATTACCATTTCACAGTAGAACAAGAAGTTGGGTCAGCCACTCATGCTTTCTTTGGTTTCAATGGGACAGCTGGTGTTTGGAGACTAGCTGCTATCAGTGAAGCAGGAGGGTGGAAAGACAGAACAACAGTGGAAGATATGGACCTTGCTGTTCGTGCCAGTCTTAGGGGATGGAAATTTGTATACCTTGGAGACCTCCAGGCTAAAAGTGAGCTTCCAAGTACTTTGAGAGCCTTCAGATTTCAGCAGCATAGATGGTCTTGTGGACCGGCTAATCTGTTCCGAAAAATGGTGATGGAGATAATAAGGAACAAGAGAGTGAGGTTCTGGAAGAAAGTATATGTTATATACAGCTTCTTCTTTGTTCGTAAGATCATAGCGCATATGGTCACCTTCTTCTTCTATTGTGTGGTGCTTCCCCTTACAATTTTGGTCCCTGAGGTTCATGTTCCAATATGGGGAGCTGTTTATATTCCTTCCATTATCACCATTCTCAATTCAGTTGGAACACCAAGGTCAATTCATCTCTTGTTCTATTGGATCCTTTTTGAGAATGTGATGTCTTTGCACAGAACCAAGGCTACCTTAATAGGTCTTTTTGAAGCTGGGAGAGTTAATGAATGGGTTGTTACTGAAAAACTTGGGGACTCTGTCAATAATAATAAAAAAGATGCTGCCAAGAAGACTAATGTCAAAGCCACTAAGAAAAGATCCAAGTTTTTTGAAAGGCTGAATTTATTGGAGTTGGGATTTGCAGCTTTCCTCTTCATATGTGGTTGCTATGATTTTGTTCATGGGAAACACAACTACTTTATCTATCTCTTCCTTCAGACCATATCTTTCTTAATTGTAGGATTTGGCTATGTTGGCACCATTGTCTAA 1611 0.4091 MVESQPKFFIPEAIHGVSTDLSGQVQMIWDVIKAPLIVPMLNAGVVICLVMALMLFFERLYMGIVIVLVKLFWKKPDKRYKFEPIQDDVEVGSSNYPVVLIQIPMFNEKEVYKVSIGAACGLSWPSDRLVIQVLDDSTDPVIKQLVEMECQRWASKGLNITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFKPEPDFLRRAIPFLVGNPDIALVQARWRFVNSDECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRLAAISEAGGWKDRTTVEDMDLAVRASLRGWKFVYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIIRNKRVRFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATLIGLFEAGRVNEWVVTEKLGDSVNNNKKDAAKKTNVKATKKRSKFFERLNLLELGFAAFLFICGCYDFVHGKHNYFIYLFLQTISFLIVGFGYVGTIV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0309 536 PANTHER - 5 536 - -
Lal9g0309 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 378 IPR029044 -
Lal9g0309 536 Pfam Glycosyl transferase family group 2 190 398 IPR001173 -
Lal9g0309 536 PANTHER BNAC09G36340D PROTEIN 5 536 - -
Lal9g0309 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Lal9g0309 536 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0309 Lal-Chr9 2008029 2013915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0309 5 536 Miscellaneous Gene Families AT5G22740 81.682 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0309 K13680 - gmx:100802752 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0309 9 2008029 2013915 Lal9g0309 9 2008029 2013915 ECH
Lal1g0416 1 2582049 2587730 Lal9g0309 9 2008029 2013915 LSH