Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0286 ATGAGCAATTCTCACACTGAAAATCTTGAGGAGCCAACTGTTGCGGGATTTGAAGTTCCCAAGTCTCCTGATTCTAGTTACAATAATGTGTACACTGGACATGAAGATGAGGCACGTGAACCACCTTTTGTCCCCTTCCATTTGCAACACACCTTGCTCAGTTATCCTACTAATAGTAGGGATAATTCAGGAAGTCTTCCATTGCCTCAGAATGTGATTCTAAACCATCTCTATATTGAGAACAGAGAGTCTTCAAGATCTGTTGTGGCATTAGGATATACCCATCGCTTCCGTTCTAAATATGTTACTGTTGTCCTTTACAAACCAGTCCAAAGAAGTTGA 342 0.4094 MSNSHTENLEEPTVAGFEVPKSPDSSYNNVYTGHEDEAREPPFVPFHLQHTLLSYPTNSRDNSGSLPLPQNVILNHLYIENRESSRSVVALGYTHRFRSKYVTVVLYKPVQRS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0286 113 MobiDBLite consensus disorder prediction 1 40 - -
Lal9g0286 113 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 38 109 IPR006828 GO:0005515
Lal9g0286 113 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 112 IPR043554 -
Lal9g0286 113 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-3 1 112 IPR030067 GO:0009744|GO:0043562
Lal9g0286 113 Gene3D - 14 110 - -
Lal9g0286 113 SMART AMPKBI_2 20 110 IPR006828 GO:0005515
Lal9g0286 113 SUPERFAMILY AMPKBI-like 13 110 IPR037256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0286 Lal-Chr9 1808135 1810583 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0286 - - lang:109353560 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0286 9 1808135 1810583 Lal9g0286 9 1808135 1810583 ECH
Lal2g0305 2 1809209 1812123 Lal9g0286 9 1808135 1810583 LSH