Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0258 ATGAGAACAAGCAACCACTTGATAGGTGCACTAAACTTCTTAACCTTCTTGCTTTCAATCCCAATCTTAGGGGGTGGAATATGGTTAAGCAGCAGATCAAACAACACAGATTGTCTTCAGTTCCTTCAATGGCCTCTCATCATAATAGGTATCAGCATCATGGTAATCTCCTTAGCAGGTTTCGCAGGCGCGTGTTACCGCAACACCTTTTTAATGAGACTCTACCTCGTTGCCATGTTCATAATCATAGCTGTGCTTATTGGGTTCATAATATTTGCATATGTTGTAACTGACAAAGGGTCCGGTCGAAAGGTCATGAACCGGGTTTACTTGGATTATTACCTTCAAGATTACTCGGGTTGGCTTGAGGAGCGCGTGGCGAGTGATAGTTACTGGGGGAAGATTAGCTCGTGTGTTAGAGACTCTAACACGTGTCGTAAGATGGCTAGAAATTATAATGGTGTGCCTGAATCTGCTGATATGTTCTACCGTAGAAGCCTCACCTCTATTCAGTCTGGTTGCTGCAAGCCCCCAACAGATTGTGGGTATATATATCAGAACGAGACAATGTGGAACCTAGGAAATGGACTTATGTCAGCCAACCCAGATTGCACTAAGTGGAGCAATGACCAACAACAGCTATGCTATGTTTGTGACTCATGCAAGGCTGGTGTGCTAGCTAGTGTTAGGAAAAGTTGGAGGAAAGTCTCAGTGATCAACATTGTTGTTATGATCATACTTGTAATTGTTTACATAATTGCTTATGCAGCATATAGGAACAACCGCAAGATGGATAATGATGAACCTTATGGTGAAGCAAGGATGACAAAGTCACAACCTAGTCATTTTCATCTTTAA 858 0.4231 MRTSNHLIGALNFLTFLLSIPILGGGIWLSSRSNNTDCLQFLQWPLIIIGISIMVISLAGFAGACYRNTFLMRLYLVAMFIIIAVLIGFIIFAYVVTDKGSGRKVMNRVYLDYYLQDYSGWLEERVASDSYWGKISSCVRDSNTCRKMARNYNGVPESADMFYRRSLTSIQSGCCKPPTDCGYIYQNETMWNLGNGLMSANPDCTKWSNDQQQLCYVCDSCKAGVLASVRKSWRKVSVINIVVMIILVIVYIIAYAAYRNNRKMDNDEPYGEARMTKSQPSHFHL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0258 285 PANTHER TETRASPANIN-8-RELATED 1 279 IPR044991 GO:0009734|GO:0016021
Lal9g0258 285 PANTHER TETRASPANIN-3-LIKE 1 279 - -
Lal9g0258 285 PRINTS Transmembrane four family signature 6 29 - -
Lal9g0258 285 PRINTS Transmembrane four family signature 39 65 - -
Lal9g0258 285 PRINTS Transmembrane four family signature 66 94 - -
Lal9g0258 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0258 Lal-Chr9 1610138 1613357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0258 1 276 Miscellaneous Gene Families AT5G60220 71.739 1.15e-127 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0258 - - gmx:100788977 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0258 9 1610138 1613357 Lal9g0258 9 1610138 1613357 ECH
Lal2g0269 2 1561484 1565925 Lal9g0258 9 1610138 1613357 LSH