Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0255 ATGACTCCAATGGCGGCGTCACGAATAATAATAACCCATCCATACGGTCAATCTATTCCATCAGAAACCGTTAAATTACCCTTTCTCAGCCTCAACCTCCATCTTAAATCTCACCCAAAACGGTACCGTAACGTTGGCATTCGCGCTTCAATTCGGTCACACAAGGAAAACGATCTCAATGATAAATCAAACCCTCTCGAAATTCCAAACATACCCTCCGATCCTTCCTCTTCTAGCCACGTCATCTCCAAAGATCTCCTCTCTCTTCCTCGGCCATTGTCATCGACGCTGTTCTCTGGCACAGTTTCCGATGGTACACGCCTTCGTGTTGCATATCAGGGAGTTCCTGGTGCTTATAGTGAATCAGCTGCACGGAAGGCCTATCCAAATTGTGAAGCTGTGCCTTGTGATCAATTTGATACCGCTTTTGAAGCTGTTGAAAAGTGGCTTGTTGACAGAGCAGTTTTACCAATTGAGAATTCTTTAGGAGGGAGCATCCACAGAAATTATGACCTTTTACTTCGGCACAATTTGCAAATAGTAGGAGAATTAAAATTTGCAGTCCACCATTGTCTGATGGCCAATGATGGTGTTAAACTTGAGGATTTGAACCGAGTTCTTAGTCATCCACAGGCTCTTGCACAATGTGAGAACACACTGACAAAGTTGGGATTGGTTAGAGAAGCAGTTGATGATACAGCTGGTGCTGCAAAGCACATTGCCTTTCAAAATATACGAGATGCTGGAGCAGTTGCTAGTTCGGCCGCTGCAAAGATCTATGGCTTGAATATACTTGCTGAAGACATTCAGGATGATAGCGATAATATCACCCGATTTCTAATTTTAGCGCGCGAACCTATGATTCCGGGTACAGATAGGCCATTTAAGACTAGCATAGTTTTTTCTTTGGAAGAAGGTCCTGGGGTACTTTTCATGGCCCTTGCTGTTTTTGCTCTCCGTCAAATTAACTTAACCAAGATTGAAAGTCGCCCTTTGCGGAAGAACCCTTTACGAGCGTCTGACGATAACAACAGTGTCAAGTACTTTGATTATTTTTTTTATGTTGATTTTGAAGCTTCAATGGCTGATCAGAGTGCACAAAATGCCCTAAGACATCTAAAGGAGTTCGCTACATTTTTGCGGGTGCTCGGGAGTTACCCTATGGACTGTAGCACATAG 1179 0.4351 MTPMAASRIIITHPYGQSIPSETVKLPFLSLNLHLKSHPKRYRNVGIRASIRSHKENDLNDKSNPLEIPNIPSDPSSSSHVISKDLLSLPRPLSSTLFSGTVSDGTRLRVAYQGVPGAYSESAARKAYPNCEAVPCDQFDTAFEAVEKWLVDRAVLPIENSLGGSIHRNYDLLLRHNLQIVGELKFAVHHCLMANDGVKLEDLNRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKHIAFQNIRDAGAVASSAAAKIYGLNILAEDIQDDSDNITRFLILAREPMIPGTDRPFKTSIVFSLEEGPGVLFMALAVFALRQINLTKIESRPLRKNPLRASDDNNSVKYFDYFFYVDFEASMADQSAQNALRHLKEFATFLRVLGSYPMDCST 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0255 392 SUPERFAMILY ACT-like 279 388 IPR045865 -
Lal9g0255 392 CDD ACT_CM-PDT 296 387 - -
Lal9g0255 392 ProSiteProfiles Prephenate dehydratase domain profile. 109 284 IPR001086 GO:0004664|GO:0009094
Lal9g0255 392 ProSitePatterns Prephenate dehydratase signature 2. 324 331 IPR018528 GO:0004664|GO:0009094
Lal9g0255 392 MobiDBLite consensus disorder prediction 63 79 - -
Lal9g0255 392 SUPERFAMILY Periplasmic binding protein-like II 109 290 - -
Lal9g0255 392 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 31 390 - -
Lal9g0255 392 Gene3D - 193 272 - -
Lal9g0255 392 CDD PBP2_Ct-PDT_like 109 286 - -
Lal9g0255 392 ProSitePatterns Prephenate dehydratase signature 1. 260 282 IPR018528 GO:0004664|GO:0009094
Lal9g0255 392 Gene3D - 103 192 - -
Lal9g0255 392 MobiDBLite consensus disorder prediction 53 79 - -
Lal9g0255 392 Gene3D - 291 390 - -
Lal9g0255 392 Pfam Prephenate dehydratase 110 286 IPR001086 GO:0004664|GO:0009094
Lal9g0255 392 PANTHER AROGENATE DEHYDRATASE 31 390 - -
Lal9g0255 392 ProSiteProfiles ACT domain profile. 298 387 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0255 Lal-Chr9 1582487 1586148 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0255 K05359 - gmx:100787387 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0255 9 1582487 1586148 Lal9g0255 9 1582487 1586148 ECH