Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0246 ATGGAAACTACACAGCAGAGAAGAGGTGGATTGATACAATTATCGCCGTCGCATACTCCACGCTCGAGTGATAAACAACCGAGAGATCTGCGAATTTCGGATTCGAATTCAAATTTGAGTAATCATAAGAATGATAAAGATAAAGGTGTTAATGTGCAGGTTCTTGTTCGTTGCAGGCCATTGAGTGAAGATGAAACCAGGGTGAATACACCGGTTGTGATTTCGTGTAACGAGGGAAGAAGAGAAGTTTCAGCTGTACAGAATATCGCCAACAAGCAGATCGATAAGAATTTCGCATTTGACAAGGTTTTTGGTCCCAACTCTCAGCAGAACGAAGTGTATGAGCAGGCAGTATCTCCTATTGTGTATGAAGTGCTTGAGGGATATAACTGCACCATTTTTGCATATGGTCAAACAGGAACAGGAAAGACATACACAATGGAAGGAGGTGCTAGACAGAAGAACGGAGAATTCCCTAGTGACGCTGGTGTAATCCCAAGAGCCGTGAAACATATTTTTGATATATTAGAAGCTCAAAATGCTGAGTATAGCATGAAAGTAACGTTTCTAGAGCTTTACAATGAGGAGATAACTGATCTTTTAACCCCTGAGGAAACTTCAAAAGCTGTAGATGAAAAATCTAAGAAACCTATAGCTCTTATGGAGGACGGGAAGGGCGGTGTTTTTGTCAGAGGTTTAGAAGAAGAAATTGTTTGCACCGCAAATGAGATTTACAAGATATTGGAAAAAGGTTCTGCAAAAAGGCGAACAGCTGAGACTCTTCTTAACAAGCAGAGCAGTCGTTCACACTCCATATTCTCTATCACCATTCACATTAAGGAGTGTACTCCAGAGGGTGAAGAAATGATTAAGTCTGGGAAGCTAAATCTTGTGGACCTTGCTGGCTCTGAGAATATCTCACGTTCTGGGGCAAGAGAGGGTAGAGCAAGGGAAGCTGGGGAGATAAATAAAAGCTTGCTTACACTAGGTCGAGTGATTAATGCTCTTGTTGAGCACTCAGGTCATGTTCCATATAGGGATAGCAAATTAACAAGACTGTTGAGGGATTCATTGGGTGGTAAAACCAAGACATGTGTTATTGCTACTATATCGCCTTCTATTCACTGTCTGGATGAAACCCTTAACACCTTGGATTATGCACACCGTGCTAAAAATATCAAGAACAAACCAGAGGTCAATCAAAAGATGGTGAAATCAGCACTTATTAAGGATTTGTATTCTGAAATTGACAGACTGAAGCAAGAGGTGTATGCTACAAGAGAGAAGAATGGAATATATATACCACGTGATCGTTATCTTCAAGAAGAAGCAGAGAAGAAAGCCATGTCTGAAAAGATCGAACACATGGAACTAGAAGCATTGTCTATGGATAAGCAACTGATGGAGCTTCAAGAACGCTACAATTCTCAGTTACTTTTGACCGAGGAATTGAGTGATAAACTTGGGAAAACTCAGAATACTCTAGAAGAAACTGAGTGCTCATTGTTTGATCTTGAGGGAAGGCACAAACATGCAAATGTAACAATTAAGGAAAAGGAATTTCTGATATCAAATCTATTGAAATCTGAAAAAACAGTTGTGGAGCATGCAATTGAGCTACGAACAGAGCTTGAGAAAGCTGCATCCGATGTGTCAAACCTGTTCTCGAAAATTGAGCGGAAGGATAAAATTGATGAAGGAAATAGAATACTTATCCAGAAATTCCAGTCTCAGTTAGCTCTACAGCTTGAAGACTTGCACAAGACAGTTGCAGAATCTGTAATGCAACAAGAGCAGCAATTGAAGGAAATGGAGGAAAATGTGCACTCTTTTGTATTAACAAAGTCACAGGCTACTGAAGATCTTAGAAATCGGGTTGGTAAATTAAAAAACATGTATGGTTCTGGCATTATAGCTTTAGATAATTTTGCTGAGAAGGTTAAAGGAAATAATCAATTAACCTTTGAAGGCTTGAATTCTGAAGTAGCCAAACATTCGTTTACCTTGGAGGATCATTTTAAAGGAATTACCTTAGAGGCTGATTCATTACTAAATGATCTTCAAAGTACTCTTCACAAGCAAGAGGCCAAGTTAACTGCTTTTGCTCGTCAACATCGAGATGCACATGCCAGATCAGTGGAGACTACACGTGCAGTATCTAAAATAACGGTGAACTTTTTGAAGACATTAGGCAAGCATGCATCCAATCTAACCCAAGTTGTGGAAGAAGCACATTCTGCCAATGATCAGAAGTTGTGTGAGCTTGAAAAAAAGTTTGAGGAGTGTACTGCTTATGAAGAAAAGCAACTATTGGAGAAGGTGGCAGAAATGCTGGCAAGCTCAAATGCTAGAAAGAAAAAACTGGTTCAAATGGCAGTTAACGATCTTCGGGAGGGTGCAAGCCATAAAACCAGTCAACTGCAGCAAGAAACATTAATGTTGCAAGATTCCACTTCTTCTATGGAAGTAGAGTGGCGAGTTCACATGGAAAGAACAGAGTCCAACTTTCATGAGGCTACTTCTGATGTAGAATCTGGAGAGAAAGTGCTTGTGGAGGTTCTTCAGAACTGCCTCAACAAGGTAGAAGTAGGTGCACAGCAATGGAGAAATGCTCAAGAGTCATTGCTTAGTCTAGAAAAGAGAAATGCTTCTTCCGTCGATGATATCATCAGGGGAGGAATGGAAGCTAATCAAGTCGCACGCACTCAATTCTCGAGTGCTGTATCAACTACACTTGAAGATGCAGAAACAGCAACCAATGATATTAACTCATCCATTGAATATTTGTTGCAACTTGATCATGAAGCTTGCGGGAATCAGAATTCTATGATTATCCCATGCTGTAATGACTTGAGAGAATTGAAGGGTGTTCACTACCATAGAATTGCAGAGATAACGGAAAATGCAGGAAAATGTCTTCTCAGTGAATACGTGGTGGACGAACCAAGTTGTTCAACGCCAAGAAAGAGAGCGTTGAGTATACCGAGTGTTTCATCCATAGAAGAACTTAGAACCCCATCATTTGAGGAACTGCTCAAGTCATTTTGGGATGCTAAATCTCCAAAACATGCAAATGGAGATGTGAAATACACAGGGGTATATGAAGCTGCTGCTCAATCGGTAATAGATTCCAGAGTTCCTCCTATTGCATGA 3153 0.4025 METTQQRRGGLIQLSPSHTPRSSDKQPRDLRISDSNSNLSNHKNDKDKGVNVQVLVRCRPLSEDETRVNTPVVISCNEGRREVSAVQNIANKQIDKNFAFDKVFGPNSQQNEVYEQAVSPIVYEVLEGYNCTIFAYGQTGTGKTYTMEGGARQKNGEFPSDAGVIPRAVKHIFDILEAQNAEYSMKVTFLELYNEEITDLLTPEETSKAVDEKSKKPIALMEDGKGGVFVRGLEEEIVCTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKSGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCVIATISPSIHCLDETLNTLDYAHRAKNIKNKPEVNQKMVKSALIKDLYSEIDRLKQEVYATREKNGIYIPRDRYLQEEAEKKAMSEKIEHMELEALSMDKQLMELQERYNSQLLLTEELSDKLGKTQNTLEETECSLFDLEGRHKHANVTIKEKEFLISNLLKSEKTVVEHAIELRTELEKAASDVSNLFSKIERKDKIDEGNRILIQKFQSQLALQLEDLHKTVAESVMQQEQQLKEMEENVHSFVLTKSQATEDLRNRVGKLKNMYGSGIIALDNFAEKVKGNNQLTFEGLNSEVAKHSFTLEDHFKGITLEADSLLNDLQSTLHKQEAKLTAFARQHRDAHARSVETTRAVSKITVNFLKTLGKHASNLTQVVEEAHSANDQKLCELEKKFEECTAYEEKQLLEKVAEMLASSNARKKKLVQMAVNDLREGASHKTSQLQQETLMLQDSTSSMEVEWRVHMERTESNFHEATSDVESGEKVLVEVLQNCLNKVEVGAQQWRNAQESLLSLEKRNASSVDDIIRGGMEANQVARTQFSSAVSTTLEDAETATNDINSSIEYLLQLDHEACGNQNSMIIPCCNDLRELKGVHYHRIAEITENAGKCLLSEYVVDEPSCSTPRKRALSIPSVSSIEELRTPSFEELLKSFWDAKSPKHANGDVKYTGVYEAAAQSVIDSRVPPIA 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0246 1050 Pfam Kinesin motor domain 57 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0246 1050 PANTHER KINESIN-LIKE PROTEIN KIN-5D 2 1048 - -
Lal9g0246 1050 PRINTS Kinesin heavy chain signature 128 149 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0246 1050 PRINTS Kinesin heavy chain signature 260 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0246 1050 PRINTS Kinesin heavy chain signature 294 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0246 1050 PRINTS Kinesin heavy chain signature 343 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0246 1050 SMART kinesin_4 49 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0246 1050 Gene3D Kinesin motor domain 47 433 IPR036961 -
Lal9g0246 1050 Coils Coil 684 704 - -
Lal9g0246 1050 MobiDBLite consensus disorder prediction 1 46 - -
Lal9g0246 1050 Coils Coil 409 429 - -
Lal9g0246 1050 Coils Coil 439 473 - -
Lal9g0246 1050 PANTHER KINESIN-LIKE PROTEIN KIF11 2 1048 - -
Lal9g0246 1050 MobiDBLite consensus disorder prediction 1 21 - -
Lal9g0246 1050 Coils Coil 587 607 - -
Lal9g0246 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 433 IPR027417 -
Lal9g0246 1050 CDD KISc_BimC_Eg5 49 402 - -
Lal9g0246 1050 ProSiteProfiles Kinesin motor domain profile. 51 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0246 1050 ProSitePatterns Kinesin motor domain signature. 293 304 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0246 Lal-Chr9 1526719 1533053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0246 51 423 Miscellaneous Gene Families AT5G06670 38.522 2.27e-65 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0246 K10398 - gmx:100816693 1687.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0246 9 1526719 1533053 Lal9g0246 9 1526719 1533053 ECH
Lal8g0123 8 841401 848021 Lal9g0246 9 1526719 1533053 PCT
Lal9g0246 9 1526719 1533053 Lal8g0123 8 841401 848021 PCT