Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0245 ATGGACGACGAATTGCTCGAGCTTCAGCGACAATTTGAATTCGCACAGCAAGCGAAATCTAGCATCCGATTATCGGAACGAAACGTCGTCGAATTGATCCAAAAACTTCAGCAACTTCAAATCATCGATTTCGAGCTTCTACACACTGTCTCTGGCAAAGAGTACATCACTCTCGATCAACTGAGGAATGATATGGTGGCTGAGGTGAATAAATTAGGGCGTATTTCTCTGATCGATCTTGCTGATGCTACTGGAGTTGATTTATACTATGTTGAAAAGCTTTCTCAGAACATTGTAACTGATCACCGTGAATTCATGCTCAATCAAGGGGAGATCATTTCTGAATCTTATTGGGACTCAATTGCCGAAGAGATTAACGAGAGGCTTCAAGAATGCAGCCAGATTGCACTCACTGAACTTGCTGCGCAATTGAATGTAGGTTTGGACATGATTTCCTCTGTGTTGGAGCCGCGACTTGGCGCTATGGTGAAAGGCAGGCTTGAAGGTGGGCAGTTATACACTCCTGCCTATGTGGCTCGTATTAGTGCTATGGTTCGAGGTGCTGCACGGGGCATCACAGTCCCGACGAATTTGACAGTGTTGTGGAGCTCGTTGCAGCAGTTACTGCAGGAAATGGAAGGATCCAGTGGCGTGGCTGTTGAAGGATCTTTCTTTCAGTCTTTGTTTAATGGACTCGTGAAGGAGGGGGAGATTCTAGGATCAGTTCGTGCAGGAGTGCACTGGACGCCAGCTAACTCTTTTATCAACTATGATGTTCTGCACAAACTTGGAATTCCCCAGCCCATTCAATTCTTGCAGTCCAGGTATCCTGAAGGCAAACCTCTAGTTACAACATTTGTTCACCCATCTATGATTGAGATGCTAGATGCTGCTACTGAGGATGCTATTGAGCGTGGCAGCTGGAGTGACTCTCTTTCCTTATTGCCATCATCTTTTTCTCCTCAAGATGCTTCTAGAATGTTGTCCCAATGTCAAGCTGTTCAATTAGCTCTTAAGTCCAACAAAGCACACATTTTTGGGGATTTTTATGTGCTGGGCAGCAGCTTTATGAAGGATATTTGTGATCTCATCATGAAAGAGTTGGAGACATTAAGTGTTTCAGGATCTTCTGGCACTATGATGTCAGGTGACTTACAAGTAGCCAGTGAAGCAAAAGTGGGGTATCATTCAAGCAGGTTTAGTGAATCCAATGAAGTGGTGAGTGATAGTGGTGTCAACAGGAATGTTGATAAAGGTTCGAAGAAGAAAAAGGGAAAAGGCACTGGAAATACAGTAGCAAATCTATCTGAAAGTGGTCCAGATAACCAGGATCAGACTTCCACAAAATCTAAGAAAAGCCAGAGAAGGGGCAAGGATACATCTTCACAAACATCAGATTCAAAGCCAAGTTCTAGGAAAGAATCACTTAAAATGAAAGAGGATAATCTCAGTACTCCCTCAGAAGAATGGATCATGCAGAAGATTGCAACCTTGGTTCCTGATTTTGAAGAACAAGGTGTAGATGATCCAGAAACAATTCTGAGGCCTTTGGCTAACCAATTAAGGCCTACAATAATCAGTTCTTGGTTGGAGAAAAAGAAGGCATTGCTTACAGAAAATGCAGAAAGAATGAGACATTTGCTTGATATTTTGCAGAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAACTATTTGAAGATGATCAATCAATTTCTGTTGTTTTGCACAGGCATTTACTAAGGACAGTGGCAGCTCCTATGGTGGATTTGCTTCTTCAGAAGCTGGATGAGCACAACAAATTAAAGAGTGGAGTTGATGTACAAGAGGAAGATCCAAATTCTGAGCCTGATTCACTTAATCCTGGAGACAGAGTTGCAATTTCTAGGAATTTCCCAGGAACTCTTTCAAAAAAGGCTCTTGCCGTTGCAGAAGCATTGGAAGGAAAGAGGGTGGAAATATTCACGGATGCTTTTAGAATGTTAACAGAAGAGAGTGGATTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTTTGCATTCATATCGTAAGGAATTGACATCTCAAGTTTCTGATGAAACTGATCCTGTATCTCTTCTGCCAAAAGTTGTTTCTTTACTTTATATCCAGGTTCACCATAAAGCTCTTCAAGCCCCTGGAAGGGCCATTTCTGTTGCAATTTCCCGGCTGAAGGATAAGCTAGACGAGTCAGCTTACAAGATTTTAACTGATTATCAAACTGCTACGGTGACTCTTTTGGCATTATTATCAGCTGCACCTGGTGATGAAGATGATTGTGCATCTGATAGAATTTTGAGTAAAAAGGAGCTTCTGCAAAACCAAATGCTGGATCTCAAAAGCGTGGTTTTGAGGACCACACAATCGTCATAG 2418 0.4202 MDDELLELQRQFEFAQQAKSSIRLSERNVVELIQKLQQLQIIDFELLHTVSGKEYITLDQLRNDMVAEVNKLGRISLIDLADATGVDLYYVEKLSQNIVTDHREFMLNQGEIISESYWDSIAEEINERLQECSQIALTELAAQLNVGLDMISSVLEPRLGAMVKGRLEGGQLYTPAYVARISAMVRGAARGITVPTNLTVLWSSLQQLLQEMEGSSGVAVEGSFFQSLFNGLVKEGEILGSVRAGVHWTPANSFINYDVLHKLGIPQPIQFLQSRYPEGKPLVTTFVHPSMIEMLDAATEDAIERGSWSDSLSLLPSSFSPQDASRMLSQCQAVQLALKSNKAHIFGDFYVLGSSFMKDICDLIMKELETLSVSGSSGTMMSGDLQVASEAKVGYHSSRFSESNEVVSDSGVNRNVDKGSKKKKGKGTGNTVANLSESGPDNQDQTSTKSKKSQRRGKDTSSQTSDSKPSSRKESLKMKEDNLSTPSEEWIMQKIATLVPDFEEQGVDDPETILRPLANQLRPTIISSWLEKKKALLTENAERMRHLLDILQKKLDESFLNMQLYEKALELFEDDQSISVVLHRHLLRTVAAPMVDLLLQKLDEHNKLKSGVDVQEEDPNSEPDSLNPGDRVAISRNFPGTLSKKALAVAEALEGKRVEIFTDAFRMLTEESGLPLKKLDKKLERTLLHSYRKELTSQVSDETDPVSLLPKVVSLLYIQVHHKALQAPGRAISVAISRLKDKLDESAYKILTDYQTATVTLLALLSAAPGDEDDCASDRILSKKELLQNQMLDLKSVVLRTTQSS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0245 805 MobiDBLite consensus disorder prediction 398 414 - -
Lal9g0245 805 Coils Coil 534 554 - -
Lal9g0245 805 MobiDBLite consensus disorder prediction 427 447 - -
Lal9g0245 805 Pfam E3 UFM1-protein ligase 1 4 271 IPR018611 GO:0061666|GO:0071569
Lal9g0245 805 PANTHER E3 UFM1-PROTEIN LIGASE 1 1 803 IPR018611 GO:0061666|GO:0071569
Lal9g0245 805 MobiDBLite consensus disorder prediction 470 484 - -
Lal9g0245 805 Coils Coil 22 42 - -
Lal9g0245 805 MobiDBLite consensus disorder prediction 398 486 - -
Lal9g0245 805 MobiDBLite consensus disorder prediction 448 462 - -
Lal9g0245 805 MobiDBLite consensus disorder prediction 610 632 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0245 1 771 EF-hand Containing Proteins AT3G46220 60.787 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0245 K22755 - gmx:100808087 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0245 9 1510835 1519602 Lal9g0245 9 1510835 1519602 ECH