Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0204 ATGGTTCAGTATAACTTTAAGAAAATTACTGTGGTGCCAAATGGGAAGGATTTCATTGATATCATCCTTTCTCGGACCCAGCGTCAGACACCTACAGTTGTACACAAAGGATATGCTATTACCCGTCTCCGTCAGTTTTATATGCGCAAAGTGAAGTACACCCAACAGAACTTTCATGAGAAGCTCTCAACCATCATTGACGAGTTCCCTCGGCTTGATGATATTCATCCTTTTTATGGTGATCTACTCCATGTGCTATACAACAAAGACCATTACAAGCTTGCACTCGGACAAATCAATACTGCTAGGAATCTTATTGGTAAGATTGCCAAGGATTATGTGAGATTGCTGAAATATGGTGACTCACTATACCGGTGCAAGTGTCTGAAGGTTGCTGCTCTTGGCCGCATGTGCACTGTGCTTAAGAGGATTGGCCCAAGTTTGGCTTACCTTGAGCAGATTAGACAACATATGGCTAGGCTTCCATCAATCGATCCAAATACCAGGACCGTCTTGATTTGTGGATATCCTAATGTTGGCAAGAGCTCATTCATTAACAAAATTACCAGAGCTGATGTCGATGTGCAGCCTTATGCATTCACTACAAAGTCACTCTTTGTAGGTCATACGGACTACAAGTACCTCAGGTACCAAGTAATTGATACCCCAGGGATTTTGGACAGACCTTTTGAAGATCGTAATATTATTGAGATGTGCAGTATCACTGCTCTAGCACATCTTAGAGCTGCAATATTGTTTTTCTTGGACATATCTGGGTCATGTGGTTACACTATTGCACAGCAGGCAGCTCTATTTCACAGCATCAAGTCTTTGTTCATGAACAAGCCATTAATTATTGTCTGCAACAAGACAGACTTGCAACCCCTTGACGGCTTATCTGAGGAAGACATGAAATTAGTCATGGAGATGAAATCTGAAGCCTTGAAAACTGTTATTGGTCAAGACGGTGATGTTACAAATGATGAGGGTGTGTTGTTGACGATGAGCACTTTGACAGAAGATGGGGTAATGACAGTTAAAAATGCAGCATGTGAAAGGTTGTTGAATCAGAGGGTGGAGATAAAGATGAAGTCGAAGAAAATTAATGATTGCTTGAATAGGTTTCATGTTGCATTACCAAAACCTCGTGACCAGAAGGAAAGGCTTCCATGTATTCCTCCAGCAGTTCTAGAAGCTAGGTCTAAGCAAGCAGCTGAGAATGAAAATAGGAAAACTGAAAAGGAGCTGGAGAATGAGAATGGTGGGGCAGGTGTATACTCGATGAACTTGAGAAAGCATTACATTTTAGCTAATGATGAATGGAAAGAAGATATACTGCCAGAAATTTTGGATGGTCACAATGTGTATGATTTCATTGATCCTGATATTCTGCATAGAGTTGAAGAGTTGGAAAGAGAAGATGGGTTTAGACAGGCAGAGGATGAAGATGATTTTGAGATAGATGGGACTGAATTAACTCCAGAACAGCTAGCAGCTTTAGCTGAGATCAGGAAAAAGAAAAGCCTGCTCATTCAACAGCATAGGATCAGAAAGAGCACAGCAGAGAGCCGGCCAACTGTTCCAAGGAAATTTGACAAGGACAAGCAATTCACATCAGAAAGAATGGGAAGGCAGCTGTCATCTTTGGGGCTTGATCCAAGTTTGGCAATTAACAGAATGCGCAGCAGGTCTGTGTCTAGGAAAGGTCGGAAAAGGGATAGATCACCTGAGAGTGCTCATGGTGGAGATGGAATGGATATCGATGGTGACACACCTAGCAAGAAGCAGCGTCTCAGTAGGTCACGGTCACGGTCCAGGTCGGTCATGCGCCCAGCAAATGAAGTTGTACCAGGAGAGGGCTTCAAGGATTCTATTCAAAAGAGCAAAGCTATTAAACTTGCAAAGAAATCTAATAAAAAGAGAAACAAGGATGCTCGTCGTGGAGAAGCTGATAGAGTTATACCTAATCTGAAGCCCAAACACTTGTATTCTGGGAAGCGCTCCAGTGGAAAAACTGACAGACGCTGA 2028 0.4241 MVQYNFKKITVVPNGKDFIDIILSRTQRQTPTVVHKGYAITRLRQFYMRKVKYTQQNFHEKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKDYVRLLKYGDSLYRCKCLKVAALGRMCTVLKRIGPSLAYLEQIRQHMARLPSIDPNTRTVLICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDISGSCGYTIAQQAALFHSIKSLFMNKPLIIVCNKTDLQPLDGLSEEDMKLVMEMKSEALKTVIGQDGDVTNDEGVLLTMSTLTEDGVMTVKNAACERLLNQRVEIKMKSKKINDCLNRFHVALPKPRDQKERLPCIPPAVLEARSKQAAENENRKTEKELENENGGAGVYSMNLRKHYILANDEWKEDILPEILDGHNVYDFIDPDILHRVEELEREDGFRQAEDEDDFEIDGTELTPEQLAALAEIRKKKSLLIQQHRIRKSTAESRPTVPRKFDKDKQFTSERMGRQLSSLGLDPSLAINRMRSRSVSRKGRKRDRSPESAHGGDGMDIDGDTPSKKQRLSRSRSRSRSVMRPANEVVPGEGFKDSIQKSKAIKLAKKSNKKRNKDARRGEADRVIPNLKPKHLYSGKRSSGKTDRR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0204 675 Pfam NOG1 N-terminal helical domain 6 165 IPR041623 -
Lal9g0204 675 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 1 675 - -
Lal9g0204 675 CDD NOG 169 355 - -
Lal9g0204 675 MobiDBLite consensus disorder prediction 517 540 - -
Lal9g0204 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 310 IPR027417 -
Lal9g0204 675 MobiDBLite consensus disorder prediction 403 418 - -
Lal9g0204 675 Pfam NOGCT (NUC087) domain 410 463 IPR012973 -
Lal9g0204 675 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 1 675 - -
Lal9g0204 675 Coils Coil 402 422 - -
Lal9g0204 675 MobiDBLite consensus disorder prediction 570 597 - -
Lal9g0204 675 Pfam Nucleolar GTP-binding protein 1 (NOG1) 236 292 IPR010674 GO:0005525
Lal9g0204 675 Gene3D - 162 373 IPR027417 -
Lal9g0204 675 PRINTS GTP1/OBG GTP-binding protein family signature 171 191 IPR006073 GO:0005525
Lal9g0204 675 PRINTS GTP1/OBG GTP-binding protein family signature 192 210 IPR006073 GO:0005525
Lal9g0204 675 PRINTS GTP1/OBG GTP-binding protein family signature 219 234 IPR006073 GO:0005525
Lal9g0204 675 MobiDBLite consensus disorder prediction 401 420 - -
Lal9g0204 675 PIRSF NOG1 1 675 IPR024926 -
Lal9g0204 675 MobiDBLite consensus disorder prediction 516 675 - -
Lal9g0204 675 Gene3D - 3 161 - -
Lal9g0204 675 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 169 355 IPR031167 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0204 Lal-Chr9 1270457 1274280 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0204 K06943 - gmx:100795311 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0204 9 1270457 1274280 Lal9g0204 9 1270457 1274280 ECH
Lal2g0200 2 1190746 1194740 Lal9g0204 9 1270457 1274280 LSH