Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0203 ATGAGTCTTATGATGATGATGATGTTGAGATGGAATATGAATTGGATGCCAATGGTGTGTTGTATCCATTCATCTCACTTCTATTTCACCTCTCTTCAACTTCAACAACAACAACAACAACAACAAACCCTTCGTCGTTTCCCAAGGTTCAAACTTTTCTCTCAACCATCTTTCTCTTCTGCTCCAACTTCTTCACCATCTCTTGATACCTCACACCTCCGTTGTTCCATGCCACACAACCACAACCTCCGAGTTGCCGTTCTTCTTAGCGGCGGTGTTGATAGCAGTGTTGCTCTCCGCCTTCTCCACGCCGCCGGTCACTCTTGCACCGCCTTCTACCTCAAAATTTGGTTCCAAGAAGACTTTGAAAACTTTTGGTCACAGTGTCCCTGGGAAGATGATTTGAAGTATGCCAAACAAGTTTGTCATCAGGTTGATGTGCCATTAGAAGTTGTGCATTTGACGGATGAGTACTGGAACAATGTGGTTTCTTACATCATTGAAGAGTATCGTTGTGGTCGCACTCCTAACCCGGATGTTCTCTGCAATACGAGAATAAAGTTTGATATTATTTTCTTAGGTGCATTCTTGGATGCAATCAACAATATGGGTTTTGACTATGTTGCTTCTGGACATTATGCAAGGGTTATCCACCCATCTTCAGATCAAATGGATGAGCCTTCTATTCTAGAACTATCACAAGACATGGTGAAGGATCAAACATACTTCCTTTCGCACCTTTCACAATCCCAGCTGAAACGACTTCTTTTTCCGCTTGGTTGTATTCCCAAGGTTTGTTCTGACTGCCTCGTTCACATTTACAATGCTGAAGTTGCATTTTATTTTGTCAGTGATTCGGATGAAGTCCGTAAGCTTGCCTCAAAATTCGATCTTCCAAATAAGGATAGAAAGGATTCCCAAGGAATATGCTTTTTGGGCAAGATAAGGTTCAGTGAATTTGTTGCACGGCATATTGGGGAGAGAGAAGGTATCATACTGGAAGCAGAGACAGGAGATTTTCTTGGCAAACATCGAGGCTTCTGGTTTTATACTATTGGTCAGCGCCAGGGTCTACGGCTACCTGGAGGCCCATGGTACGTTGTTGAGAAGGACATTAAAAATAATGTTGTTTTCGTGTCAAGAAATTACTTTTCCTTTGACAAAAGAAGGCGCTTATTTCGCGTTGGCTCTTTTAAGTGGCTTAGTGGGCAGCCCCCAAGCCAGACAAGTCAGATCCAATGCAAGGTGAGACATGGTCCTGGGTTCTATAATTGTAGCTTAGAGATGGAAGATGGAGGAGATGGCATTGGAGACTCTGCTGTTGTTCGCTTATCTGAAGATGATCAAGGCCTAGCTGCCGGACAGTTTGCAGCCTTTTACGAGGGAAGAACATGTATAGGCTCTGGTGTGATTTTGGAGTCCTGGGACGATCAAAGTTTTCCTGTATGTACAAAAGCGTTGGAAATTGCAAGAATGGAAGATAAATCGACGCTTGGGAATCCAGTTAAGATAAAAGTTAAACCAGACAGCCCACAGGAGGTTCGCAGTTCCACAGAGGTAACAAGCAAAGCATCATAA 1578 0.4328 MSLMMMMMLRWNMNWMPMVCCIHSSHFYFTSLQLQQQQQQQQTLRRFPRFKLFSQPSFSSAPTSSPSLDTSHLRCSMPHNHNLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWEDDLKYAKQVCHQVDVPLEVVHLTDEYWNNVVSYIIEEYRCGRTPNPDVLCNTRIKFDIIFLGAFLDAINNMGFDYVASGHYARVIHPSSDQMDEPSILELSQDMVKDQTYFLSHLSQSQLKRLLFPLGCIPKVCSDCLVHIYNAEVAFYFVSDSDEVRKLASKFDLPNKDRKDSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDIKNNVVFVSRNYFSFDKRRRLFRVGSFKWLSGQPPSQTSQIQCKVRHGPGFYNCSLEMEDGGDGIGDSAVVRLSEDDQGLAAGQFAAFYEGRTCIGSGVILESWDDQSFPVCTKALEIARMEDKSTLGNPVKIKVKPDSPQEVRSSTEVTSKAS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0203 525 MobiDBLite consensus disorder prediction 498 525 - -
Lal9g0203 525 Pfam tRNA methyl transferase PRC-barrel domain 319 381 IPR046884 -
Lal9g0203 525 CDD tRNA_Me_trans 84 471 IPR004506 GO:0008033|GO:0016740
Lal9g0203 525 MobiDBLite consensus disorder prediction 511 525 - -
Lal9g0203 525 Hamap tRNA-specific 2-thiouridylase MnmA [mnmA]. 83 472 IPR004506 GO:0008033|GO:0016740
Lal9g0203 525 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 84 356 - -
Lal9g0203 525 Gene3D - 324 383 IPR023382 GO:0016783
Lal9g0203 525 Pfam tRNA methyl transferase HUP domain 84 264 - -
Lal9g0203 525 Pfam tRNA methyl transferase HUP domain 287 314 - -
Lal9g0203 525 Gene3D HUPs 70 323 IPR014729 -
Lal9g0203 525 Gene3D Translation factors 390 480 - -
Lal9g0203 525 PANTHER - 37 504 - -
Lal9g0203 525 Pfam Aminomethyltransferase beta-barrel domain 391 471 IPR046885 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0203 K21027 - gmx:100785275 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0203 9 1266069 1273758 Lal9g0203 9 1266069 1273758 ECH