Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0160 ATGACTTCCCTTCCCACCACCCCTAACGGCGTTCAGATCCACCACACACGGAGGCTACCCGATTTCCTCCAAAGTGTGAATCTGAAGTACGTGAAACTTGGTTATCATTACCTCATCACTCATCTATTTACCCTAACCTTGATCCCTCTTATGGCTCTAATCATAGTCCAAGCCTCTCAGATGAACCCTCAGGATATCCACACCCTATGGCTACACCTCAAGTACAACCTCGTCACCGTTATCATATGCTCCACCATCCTTGTTTCTGGATCCACTGTTTTCTTCATGACCCGACCCAGATCCATATTCCTTGTTGACTATTCATGCTACCGACCACCTTCAAATCTCACCGTCCAATTCAACCAGTTCATGGAACATTCTAGACTCACTGGTGACTTTGATGAATCGTCACTCGAGTTTCAACGCAAGATTCTTCAACGTTCTGGACTTGGAGAAGAGACATACGTACCTGAAGCAATGCACCATATCCCACCTACACCTTCAATGGCTGCTGCCAGAGAAGAAGCTGAACAAGTCATGTATGGTGCACTTGATAATCTCTTTGCTAATACTCAGGTTAAACCCAAAGATATTGGTATTCTTGTTGTGAATTGTAGCTTGTTTAACCCCACTCCTTCGCTTTCGGCTATGATAGTGAATAAGTATAAGTTGAGGGGTAATATAAGGAGTTTTAACTTAGGGGGTATGGGTTGTAGTGCTGGTGTTATAGCAATTGATCTTGCAAAGGATATGCTTCAGGTTCATAGGAATACTTATGCTGTTGTTGTTAGTACTGAGAACATTACTCAGAATTGGTACTTTGGGAATAAGAAGTCTATGTTGATACCTAATTGCTTGTTTCGTGTCGGTGGCTCTGCTGTTTTGCTATCTAACAAGTCCTCTGATAAGAGGAAATCCAAGTACCGGCTTGTTCATGTTGTGAGGACTCATAAAGGTGCGGATGATAAGGCGTTTAAGTGTGTTTATCAGGAACAGGATGATGTTGGGAAAACCGGTGTTTCGTTGTCAAAGGATCTCATGGCTATTGCTGGTGGTGCTCTTAAGACTAATATCACAACCTTGGGTCCACTTGTTTTGCCAATCAGTGAACAGCTTTTGTTCTTTTCTACTTTGATTACTAAGAAGCTGTTTAATTCCAAGGTGAAGCCTTATATCCCGGATTTCAAGCTTGCCTTTGAACATTTCTGTATACATGCTGGTGGGAGAGCTGTGATTGATGAGCTTGAGAAGAATCTGCAGCTTATGCCAGTGCATGTTGAGGCATCTAGGATGACTCTGCATAGGTTTGGGAACACTTCCTCTAGTTCAATTTGGTATGAGTTGGCTTACATTGAAGCAAAGGGGAGGATGAGGAAGGGAAACAGGGTGTGGCAGATTGCATTTGGGAGTGGATTTAAGTGTAACAGTGCAGTGTGGCAGGCCCTGAGGCATGTCAAGCCATCACCAAAGTCTCCATGGGGAGATTGCATTGATAAGTATCCAGTTCAGATTCTTGCTTAG 1521 0.4346 MTSLPTTPNGVQIHHTRRLPDFLQSVNLKYVKLGYHYLITHLFTLTLIPLMALIIVQASQMNPQDIHTLWLHLKYNLVTVIICSTILVSGSTVFFMTRPRSIFLVDYSCYRPPSNLTVQFNQFMEHSRLTGDFDESSLEFQRKILQRSGLGEETYVPEAMHHIPPTPSMAAAREEAEQVMYGALDNLFANTQVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSSDKRKSKYRLVHVVRTHKGADDKAFKCVYQEQDDVGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFSTLITKKLFNSKVKPYIPDFKLAFEHFCIHAGGRAVIDELEKNLQLMPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWQALRHVKPSPKSPWGDCIDKYPVQILA 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0160 506 PANTHER 3-KETOACYL-COA SYNTHASE 4 11 504 - -
Lal9g0160 506 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 400 480 IPR013747 -
Lal9g0160 506 Gene3D - 107 481 IPR016039 GO:0016746
Lal9g0160 506 SUPERFAMILY Thiolase-like 90 304 IPR016039 GO:0016746
Lal9g0160 506 Pfam FAE1/Type III polyketide synthase-like protein 95 383 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lal9g0160 506 PANTHER 3-KETOACYL-COA SYNTHASE 11 504 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lal9g0160 506 CDD CHS_like 87 479 - -
Lal9g0160 506 SUPERFAMILY Thiolase-like 311 480 IPR016039 GO:0016746
Lal9g0160 506 PIRSF Very_long_ch_3-ktacl-CoA_syn 21 506 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0160 Lal-Chr9 1011685 1013205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0160 12 504 Miscellaneous Gene Families AT1G19440 84.990 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0160 K15397 - pvy:116136949 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0160 9 1011685 1013205 Lal9g0160 9 1011685 1013205 ECH