Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0145 ATGCTTGTCTTGTTTGAGACGCCGGCGGGGTTTGCCCTTTTTAAGGTGCTAAATGAAGGGAAGCTTTCCAAAGTTGAGGATTTAGGGAAGGACTTCTCCACTGCAGATTCTGCCAGACAGGTTGTCAAGTTGAAAGCTTTCTCAAAGTTTGAGAATACATCAGAAGCTCTAGAGGCAGCTACTTTGCTGATAGAAGGGAAAGCTAGCAAGGGTCTGCGCAAGTTCTTGCGTGTTCATTGTGAAAATGAAACACTAGCTGTTGCTGATTCAAAGCTTGGAAATATGATTAAGGAGAAACTGAAAATTGACTGTCTTCACAACAATGCGGTGATGGAGTTGATTAGAGGTGTTAGAAATCATTTAACTGAACTCATATCTGGTTTAGCTGTACAAGACATGGCACCAATGAGCTTGGGTTTATCTCATAGTTTGTCCAGATACAAGCTCAAGTTTAGTGCAGATAAGGTGGATACCATGGTTGTCCAGGCTATTGGTTTACTTGATGATCTTGATAAAGAATTGAATACATATGCCATGAGGGTTCGGGAATGGTATGGTTGGCATTTTCCAGAGCTTACTAAAATAATACAGGATAACATCCATTATGCAAAAGCAGTTAAGTTGATGGGTGATCGCATTAATGCAGCAGCACTTGATTTCTCTGAGATTTTGCCAGAGGAAGTTGAGGCAGAAGTGAAGGAGGCATCTGTAATATCTATGGGAACTGAAATTGGTGAGCTTGATTTGGCAAATATTAGAGAACTTTGTGACCAAGTCTTGTCTCTCTCAGAGTACAGAGCACAACTCTTTGATTATTTAAAGAGCAGAATGAACACCATTGCACCAAATTTGACTGCCCTTGTTGGGGAGCTTGTTGGTGCTCGCCTCATTGCCCATGGAGGTAGCTTAATGAATCTTGCGAAGCAGCCTGGTAGTACTGTGCAGATTCTTGGTGCTGAGAAGGCTCTCTTTAGGGCACTGAAGACTAAGCATGCTACTCCCAAGTATGGTCTTATTTATCATGCATCCTTGATTGGCCAGGCAGCTCCGAAGATCAAGGGGAAGATTTCTCGGTCACTTGCTGCCAAGGCAGCATTGGCTATTAGGTGTGATGCTCTCGGAGAGCCCCAAGATAACTCTCTGGGATTGGAGAGCAGACTCAAGCTTGAAGCACGTTTGAGGAGCCTTGAGGGAAAAGAATTAGGTCGTTTTGCTGGTTCTGCCAAAGGGAAACCCAAGATAGAATCATATGACAGTGATAGGAAGAAAGGAAGCGGGGGGCTAATTACTCCAGCTAAGACATATAATCCTTCAGCTGATTCAGTTATTGGGCAATTGTCTAATTCTGCAATGGATGAAGATACACCAGAGCAAGCTATCACTGAAGAAAAGAAAGAGAAGAAAGAAAAGAAAGAAAAGAAAGAGAAAAAAGAAAAGAAAGAGAAAAAAGAAAAGAAGAAAAAGGAGGAGAAAAATGAAGAGGATGCAACTTTGCAAGCCGATGGTGATGCTGGTGAAGAACCAGAACATGATGTTGTGAAGAAGGAAAAGAAGAAAAAGAAGGATTCTGCTAACAATGACAACAATTTGGATGAGGGAGAAAAGAAGAAAAAGAGGAAAAAACGTGCAGACCAGGAAGAATCCCCTGAAATGCCAGTCAAAAAGAAAGGGAAAAAGAAAAAAAATGAGAGTTAG 1695 0.4177 MLVLFETPAGFALFKVLNEGKLSKVEDLGKDFSTADSARQVVKLKAFSKFENTSEALEAATLLIEGKASKGLRKFLRVHCENETLAVADSKLGNMIKEKLKIDCLHNNAVMELIRGVRNHLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNIHYAKAVKLMGDRINAAALDFSEILPEEVEAEVKEASVISMGTEIGELDLANIRELCDQVLSLSEYRAQLFDYLKSRMNTIAPNLTALVGELVGARLIAHGGSLMNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKIKGKISRSLAAKAALAIRCDALGEPQDNSLGLESRLKLEARLRSLEGKELGRFAGSAKGKPKIESYDSDRKKGSGGLITPAKTYNPSADSVIGQLSNSAMDEDTPEQAITEEKKEKKEKKEKKEKKEKKEKKEKKKKEEKNEEDATLQADGDAGEEPEHDVVKKEKKKKKDSANNDNNLDEGEKKKKRKKRADQEESPEMPVKKKGKKKKNES 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0145 564 Pfam snoRNA binding domain, fibrillarin 166 394 IPR002687 -
Lal9g0145 564 MobiDBLite consensus disorder prediction 431 455 - -
Lal9g0145 564 MobiDBLite consensus disorder prediction 404 564 - -
Lal9g0145 564 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 562 IPR045056 GO:0030515|GO:0031428|GO:0032040
Lal9g0145 564 MobiDBLite consensus disorder prediction 457 564 - -
Lal9g0145 564 PANTHER PROTEIN NOP56, PUTATIVE-RELATED 1 562 - -
Lal9g0145 564 Gene3D - 129 284 - -
Lal9g0145 564 SUPERFAMILY Nop domain 153 397 IPR036070 -
Lal9g0145 564 SMART NOSIC_2 159 211 IPR012976 -
Lal9g0145 564 Pfam NOP5NT (NUC127) domain 2 66 IPR012974 -
Lal9g0145 564 ProSiteProfiles Nop domain profile. 280 398 IPR002687 -
Lal9g0145 564 Coils Coil 457 500 - -
Lal9g0145 564 Gene3D Nop domain 285 397 IPR042239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0145 Lal-Chr9 927540 934329 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0145 K14565 - gmx:100775301 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0207 1 1239041 1242859 Lal9g0145 9 927540 934329 LSH
Lal2g0130 2 793517 797423 Lal9g0145 9 927540 934329 LSH