Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0133 ATGCCTGCCTTGGCTTGTTGCGTTGATCCTGCTGCACTCGCTTCTACCGGTTATGCTCTTGCCGCCGGTGATTTCTCTCTTCCGCCGCCGGTTATATTCTCCGACATTCCTCCGTCCGCAACAACAATCACCACCGCTGATTGGTCTCCATCTCTTTCAGCCAGCCTCTATAAGGTCGATGGTTGGGGCGGTTCTTACTTCGCCGTCAACTCTTCCGGCAATATCACCGTCTTGCCACACGGTTCCGATACTCTCTCTCACCAGGAGATCGATTTGCTCAAAATCGTGAAAAAAGCTTCTGATCCGAGATCATGTGGCGGACTCGGGTTACAGTTTCCTCTCATTGTTCGGTTCCCTGATGTACTCAAAAACCGTCTCGAGTCGCTTCAATCTGCTTTTGATCATGCAATCCAATCACAGGGTTATGAATCTCATTACCAAGGTGTTTATCCGGTTAAATGCAACCAGGATCGGTTCATTGTGGAGGATATAGTTTCGTTCGGGTTACCATTTCGGTTCGGGTTAGAAGCTGGATCCAAACCTGAACTCCTCCTCGCTATGAATTCTTTATGCAAGGGGAGCCCTGATGCGTTTCTGGTTTGCAACGGTTTCAAAGACAGTGAGTATATTTCTCTTGCTCTTATTGCCAGGAAGTTAGCATTGAATACTGTGATTGTTCTTGAACAAGAGCAAGAACTTGATTTGGTTATTCAGATGAGTAACAAGCTTTGCATTCGACCTGTGATTGGTCTTCGTGCGAAGCTTAGAACCAAACATGGTGGCCATTTTGGGTCCACCTCTGGTGAGAAAGGGAAATTTGGTTTAACAACCGCTCAGATTTTGAATGTTGTGAAGAAGCTTGAACATGTTGGCATGCTTGATTGCCTCCAATTGCTGCATTTCCACATCGGTTCGCAGATTCCTTCTACATCTTTGCTAGCTGATGGTGTAGGCGAGGCTGCACAGATCTACTGTGAATTGGTTCGATTGGGTGCCCAGATGGGAGTTATTGATATTGGTGGTGGTTTGGGCATTGACTACGATGGTTCAAAATCAACTGATTCTGATGTCTCAGTTGGTTATAGTTTGGAAGAGTATGCTTATGCCGTTATTCACACTGTTCAGTATGTTTGCGATCGCAGATCGGTTAAACACCCTGTGGTTTGTAGCGAGAGTGGAAGGGCAATTGTTTCTCATCATTCGGTGTTGATTTTTGAAGCTATGGCTGCGAGTGCATACTGTGCTCCTACATTGTCAACCCTTGGATTACAGTATTTGGTTGAAAGTTTATCAGAGGAGGCACGTGCTGATTATCACAACCTATATGCTGCAACCATTAGAGGCGAGTATGAAACCTGTTTGCTATACACTGATCAATTCAAACAACGATGTGTGGAGCAGTTCAAGCAGGGAACTTTAGGAATGGAACAGCTTGCCGCTGTTGATGGTTTGTGTGATTTGGTTGGTAAGACAATCAGGGCAAATGACGCGGTTCGAACATACGAAGTGAATCTGTCAGTTTTCACCTCCATTCCTGATTTCTGGGGGATTGGGCAGGTGTTTCCGATTGTCCCTATCCATCGTCTAGATGAGAAGCCAACAGTGAGGGGAGTTTTCTCTGACTTGACTTGTGACAGTGATGGGAAGATTAACAAATTCATCGGTGGTGAATCTAGCTTGCCACTTCATGAATTGGAAGGAAGCCATGGCAGTGGTGGGTACTATTTGGGAATGTTCTTGGGTGGGGCTTATCAGGAGGCGCTTGGTGGTGTCCACAACCTGTTTGGTGGCCCGAGTGTTGTTCGCGTGTTACAGAGCGATGGCCCTCATGGCTTTGCTGTGACACGTGCAGCGCCTGGACCTTCATGTGGAGATGTCCTCCGAGTGGTGCAGCACGAGCCGGAGCTCATGTTTGAGACCCTCAAGCACCGTGCAGAAGAGTTAGCTGATGATGATGGCAATAGTGCAGTTAGTGCTTCGGAGTTGGCATCTTGCCTCGCTAGCTCATTCAGCAAGATGCCATATCTGGTTGCATCATCATGTGGCTTAAATGTAAAGAATAATAATCAGAATAATAATGGCTTTTACTACTGCTCCAGTGATGATGATTATAATGCAGCTATTGCTGAACCTGCTGCTGAAGGTGGAGAAGAGGAGCAGTGGTCTTATTGCTGTGCTTGA 2181 0.4658 MPALACCVDPAALASTGYALAAGDFSLPPPVIFSDIPPSATTITTADWSPSLSASLYKVDGWGGSYFAVNSSGNITVLPHGSDTLSHQEIDLLKIVKKASDPRSCGGLGLQFPLIVRFPDVLKNRLESLQSAFDHAIQSQGYESHYQGVYPVKCNQDRFIVEDIVSFGLPFRFGLEAGSKPELLLAMNSLCKGSPDAFLVCNGFKDSEYISLALIARKLALNTVIVLEQEQELDLVIQMSNKLCIRPVIGLRAKLRTKHGGHFGSTSGEKGKFGLTTAQILNVVKKLEHVGMLDCLQLLHFHIGSQIPSTSLLADGVGEAAQIYCELVRLGAQMGVIDIGGGLGIDYDGSKSTDSDVSVGYSLEEYAYAVIHTVQYVCDRRSVKHPVVCSESGRAIVSHHSVLIFEAMAASAYCAPTLSTLGLQYLVESLSEEARADYHNLYAATIRGEYETCLLYTDQFKQRCVEQFKQGTLGMEQLAAVDGLCDLVGKTIRANDAVRTYEVNLSVFTSIPDFWGIGQVFPIVPIHRLDEKPTVRGVFSDLTCDSDGKINKFIGGESSLPLHELEGSHGSGGYYLGMFLGGAYQEALGGVHNLFGGPSVVRVLQSDGPHGFAVTRAAPGPSCGDVLRVVQHEPELMFETLKHRAEELADDDGNSAVSASELASCLASSFSKMPYLVASSCGLNVKNNNQNNNGFYYCSSDDDYNAAIAEPAAEGGEEEQWSYCCA 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0133 726 Gene3D - 417 497 - -
Lal9g0133 726 PRINTS Arginine decarboxylase signature 118 133 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 PRINTS Arginine decarboxylase signature 142 156 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 PRINTS Arginine decarboxylase signature 200 215 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 PRINTS Arginine decarboxylase signature 226 247 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 PRINTS Arginine decarboxylase signature 250 272 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 PRINTS Arginine decarboxylase signature 378 395 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 PRINTS Arginine decarboxylase signature 504 525 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 PRINTS Arginine decarboxylase signature 529 554 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 PRINTS Arginine decarboxylase signature 582 603 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 150 168 IPR000183 GO:0003824
Lal9g0133 726 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 174 186 IPR000183 GO:0003824
Lal9g0133 726 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 293 306 IPR000183 GO:0003824
Lal9g0133 726 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 407 IPR000183 GO:0003824
Lal9g0133 726 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 582 595 IPR000183 GO:0003824
Lal9g0133 726 SUPERFAMILY PLP-binding barrel 118 400 IPR029066 -
Lal9g0133 726 Gene3D Lyase, Ornithine Decarboxylase; Chain A, domain 1 57 604 IPR009006 GO:0003824
Lal9g0133 726 CDD PLPDE_III_ADC 109 603 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 Pfam Pyridoxal-dependent decarboxylase, pyridoxal binding domain 141 398 IPR022644 GO:0003824
Lal9g0133 726 PANTHER ARGININE DECARBOXYLASE 1 726 - -
Lal9g0133 726 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 331 344 IPR022657 -
Lal9g0133 726 PANTHER ARGININE DECARBOXYLASE 1 726 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 SUPERFAMILY Alanine racemase C-terminal domain-like 493 606 IPR009006 GO:0003824
Lal9g0133 726 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 150 168 IPR022653 -
Lal9g0133 726 Gene3D Alanine racemase 119 400 IPR029066 -
Lal9g0133 726 TIGRFAM speA: arginine decarboxylase 48 676 IPR002985 GO:0006527|GO:0008295|GO:0008792
Lal9g0133 726 PIRSF ARGDC 36 679 IPR002985 GO:0006527|GO:0008295|GO:0008792
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0133 Lal-Chr9 864124 866304 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0133 K01583 - egr:104453387 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0133 9 864124 866304 Lal9g0133 9 864124 866304 ECH