Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0112 ATGGATTATAGGGTTGATACTTTTGATGGTGAGAGCAAGAGAGTAGGTGATGGGGATTCTGAAAATTTGAAGGATTTGGGTGGAGAGGAGGTTTTTGAGGAGGCAGTTGAGCCACAAGATCATTTCCATGATCAAGGATCCACACTTGATTTGCTGGATGTTGATGTTGATAAATGTGACGAAACTGATGCAGTGAGTGCATTGGCTTCAGCCTCAGTTGATGAAACTTTACATGTTGCACCAGAAACGGATAATTTTGAGGAGGCAATTGATGTTGTTGCTGGTGAATCTGAGAAAGAAGCAGAGGGGGAGCCTGAGGTAAACACTGGTGAATCTGAGATACTAATAGAGGGAGAGCCTGAAATAATTGCTGGTGATTCTGAGAAACAGATTGAAGTAATTGCTGACCAGGAGCTTGAAGGGGATGGGCAGGGGCTTGATACTGTCCATCTGGAGGTAGTTGATTCTGGAGGGACTGGAGACGGACAGCTTTCTGGTGATTCCCGCGGTATGCAAGACAATAATTTCAATAGCACTGATTTGAGTGGTGGAAAGGATGAATCTGGGTTAATTAGTGATGGAGGGGTGGTAGCTACGGAGAACGGAGCCACAGAGGATGGAAACTCTGGTTTTCTGAGTGAAAATTCTGAAATTGATGATTCTAAGTTCCTGACTCCAAGAGAAAATGGTGCTGCTGTCTTGGAAAATGGAAGGACAGACAAGGTGGACTATGTTGTTACCAAGTCTAATTCGGAATCTGAATCTAATGAGGTGGTGGCAAACCAAGATACTGTTGCTGAGCATTTGAAGGATGGTGACTCAGATCCTGAATTTAGAGACCACGAGATAGAGGAATTACATGACATTTCAGATGACGGTAACAGGGATTTGGAACATCAAGGCGAAGTGATTAGTGATATGAAGGATGTGACCCCTGGCACTGATTTCAGCAGTGAGGTTAGAAATGATGGAGACACCTCCATCATCACTGACAGTCAGATCACTGAACATATGGATATTGAAGATGATGATGCTAATGCTGTATCAGACTCAGAGAAGCCGGAAGCAATTGGTGAAATAAGAACTTCTCCTGACCTGCATGAAACTGTGGAGGAAAAGGAAGTAATGCTACCTGCTGTTAACTCATTGCCCCTAGAAAATTCTGCTGATGAGATACCATCTGTTCAGGCAAGCGCATCTGATCCGAAAGAAGGAAGTAATAAGGATACTCAGTCTCATGTTTCTGAAGAAATCCACAGAGATCGTGATAACTCTTCCGTGGCACAGGAGTCTGAAAAGATACAGGAGAAGAATTTGGAAGTGAAGGAAACCACTCAAGTGACTGAAGAACTGAAGATTCAGCCTGCAACCAAGCTTCCTTCTGCATCTGAAAAATCTTCTAGTGCTGTTCCACCTCCTGTTCGTCCAGCTGGCCTTGGCCATGCAGCTCCACTATTGGAACCTGCTTCTCGGGGAGTGCAGCAGTCTCGTGCGAATGGTGCTGTGTCTAACACACAGTCCCAACAAGTGGATGACTCTTCAAACGGGGAGGCCGAGGAGTATGACGAGACTCGTGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGGCTAGCTCATAGGCTTGGGCAGACTCCACACAATGTTGTTGTAGCTCAAGTTTTGTATAGGCTAGGGCTGGCTGAGCAGCTTAGAGGAAGGAATGGGGGTCGTGTTGGTGCTTTTAGTTTTGATCGGGCAAGTGCAATGGCTGAACAGCTAGAAGCAGCAGGTCAGGATCCACTTGATTTCTCTTGTACGATAATGGTTCTTGGAAAGACAGGAGTTGGTAAAAGTTCTACCATCAATTCTATTTTTGATGAAGTTAAGTTTAATACTAGTGCCTTTCATATGGAAACCAACAAGGTTCAGGATGTCGTGGGAACTGTACAGGGGATTAAGGTACGAGTCATCGATACGCCAGGACTTCTACCCTCCTGGTCAGACCAGAGAAGCAACGAGAAGATCTTGCATTCTGTCAAGCGCTTTATTAAGAAAACACCACCTGACATTGTGTTGTATCTTGATAGGTTAGATATGCAGAGCAGGGATTTTAGTGATATGCCACTTTTACACACAATTACTGATATATTTGGACCATCCATTTGGTTCAATGCTATTGTGGTTCTGACTCATGCAGCATCTGCTCCACCTGATGGCCCTAATGGTACTGCTTCCAGTTATGACATGTTTGTCACTCAACGTTCTCATGTTGTGCAGCAAGCCATTCGTCAAGCAGCTGGAGACATGCGTCTCATGAATCCTGTATCACTGGTGGAGAACCATTCTGCATGCAGAACAAATAGGGCTGGCCAGAGGGTGTTGCCAAACGGCCAGGTTTGGAAACCTCATTTGTTACTTTTATCATTTGCGTCAAAAATTCTGTCCGAAGCAAATGCTCTTCTTAAGTTACAAGATGGCCCACCTGGAAAGCCTTATACAGCTCGATCACGACCACCTCCACTGCCTTTTTTGTTGTCATCCCTTCTCCAGTCTAGGCCGCAATTAAAGTTACCAGATGAACAGTTTGGTGATGAGGACAGTCCTGATGATGACCTTGACGAATCATCAGATTCTGATGATGAGACTGAACTTGATGATTTGCCACCATTTAAACCTTTAACAAAGGCCCAGGTGCAAAAGCTGTCCAAAGCTCAGAAGAAAGCATATTTTGATGAGTTAGAGTACAGAGAAAAGCTTTTGATGAAGAAACAATTGAAGGAAGAAAAAAAGCGACGGAAGTTGATGAAGAAAATGGCAGAATCAGTAAAAGCTCTGCCAAATGACTATAGTGAAAACGTGGAAGAAGAAAGTGGTGGTGCGGCTTCTGTTCCTGTTCCAATGCCAGATTTGTCCTTGCCTGCTTCTTTTGATTCTGATAATCCTACTCACCGGTATCGTTATCTTGATTCATCAAATCAGTGGCTTGTAAGACCTGTCCTAGAAACTCATGGATGGGATCATGATGTGGGTTACGAAGGGTTAAATGTAGAAAGATTGTTTGTAGTCAAAGACAAGATACCCCTGTCCTTTTCTGGACAGGTTACGAAGGATAAAAAGGATGCTAATGTTCAAATGGAAATAGCCAGTTCAATTAAACATGGGGAAGGGAAAGCCACTTCATTAGGTTTTGATATACAGACTGTTGGGAAGGACTTAGCTTATACATTACGCAGTGAGACAAGATTCAGTAATTTTAGGAGAAATAAGACAGCTGCTGGTCTCTCATTTACTCTCCTTGGTGATGCCTTATCAACTGGGTTGAAGATTGAAGACAAATTGGTTGCTAGTAACCGATTCAAGCTCGTTTTTAGTGGCGGTGCAATGGCAGGGCGTGGAGATGTTGCTTATGGTGGCAGTTTGGAGGCCCAATTGAGAGATAAGGATTATCCTCTAGGACGGTGGTTATCAACACTTGGCCTTTCAGTTATGGATTGGCATGGAGATCTTGCTATTGGATGCAATGTACAATCACAGATCCCAGTTGGACGACATTCAAATCTTGTTGCACGGGCCAATTTGAACAACCGAGGGGCAGGGCAAATCAGCATTCGACTAAATAGTTCAGAACAGCTTCAAATTGCTTTGATTGGTCTCATCCCTTTAATAAAGAAGTTAGTTCTATATCATCAACAAGTGCAGTTTGGACAATGA 3693 0.437 MDYRVDTFDGESKRVGDGDSENLKDLGGEEVFEEAVEPQDHFHDQGSTLDLLDVDVDKCDETDAVSALASASVDETLHVAPETDNFEEAIDVVAGESEKEAEGEPEVNTGESEILIEGEPEIIAGDSEKQIEVIADQELEGDGQGLDTVHLEVVDSGGTGDGQLSGDSRGMQDNNFNSTDLSGGKDESGLISDGGVVATENGATEDGNSGFLSENSEIDDSKFLTPRENGAAVLENGRTDKVDYVVTKSNSESESNEVVANQDTVAEHLKDGDSDPEFRDHEIEELHDISDDGNRDLEHQGEVISDMKDVTPGTDFSSEVRNDGDTSIITDSQITEHMDIEDDDANAVSDSEKPEAIGEIRTSPDLHETVEEKEVMLPAVNSLPLENSADEIPSVQASASDPKEGSNKDTQSHVSEEIHRDRDNSSVAQESEKIQEKNLEVKETTQVTEELKIQPATKLPSASEKSSSAVPPPVRPAGLGHAAPLLEPASRGVQQSRANGAVSNTQSQQVDDSSNGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQDPLDFSCTIMVLGKTGVGKSSTINSIFDEVKFNTSAFHMETNKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRSNEKILHSVKRFIKKTPPDIVLYLDRLDMQSRDFSDMPLLHTITDIFGPSIWFNAIVVLTHAASAPPDGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILSEANALLKLQDGPPGKPYTARSRPPPLPFLLSSLLQSRPQLKLPDEQFGDEDSPDDDLDESSDSDDETELDDLPPFKPLTKAQVQKLSKAQKKAYFDELEYREKLLMKKQLKEEKKRRKLMKKMAESVKALPNDYSENVEEESGGAASVPVPMPDLSLPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVKDKIPLSFSGQVTKDKKDANVQMEIASSIKHGEGKATSLGFDIQTVGKDLAYTLRSETRFSNFRRNKTAAGLSFTLLGDALSTGLKIEDKLVASNRFKLVFSGGAMAGRGDVAYGGSLEAQLRDKDYPLGRWLSTLGLSVMDWHGDLAIGCNVQSQIPVGRHSNLVARANLNNRGAGQISIRLNSSEQLQIALIGLIPLIKKLVLYHQQVQFGQ 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0112 1230 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 382 1225 IPR045058 -
Lal9g0112 1230 MobiDBLite consensus disorder prediction 153 224 - -
Lal9g0112 1230 Coils Coil 434 454 - -
Lal9g0112 1230 MobiDBLite consensus disorder prediction 852 886 - -
Lal9g0112 1230 MobiDBLite consensus disorder prediction 335 374 - -
Lal9g0112 1230 MobiDBLite consensus disorder prediction 406 447 - -
Lal9g0112 1230 ProSiteProfiles AIG1-type G domain profile. 596 825 IPR006703 GO:0005525
Lal9g0112 1230 MobiDBLite consensus disorder prediction 387 405 - -
Lal9g0112 1230 PANTHER TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-LIKE 382 1225 - -
Lal9g0112 1230 CDD Toc34_like 571 816 - -
Lal9g0112 1230 MobiDBLite consensus disorder prediction 492 514 - -
Lal9g0112 1230 Gene3D - 568 816 IPR027417 -
Lal9g0112 1230 MobiDBLite consensus disorder prediction 161 185 - -
Lal9g0112 1230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 733 IPR027417 -
Lal9g0112 1230 MobiDBLite consensus disorder prediction 307 523 - -
Lal9g0112 1230 MobiDBLite consensus disorder prediction 1 24 - -
Lal9g0112 1230 TIGRFAM 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains 475 1222 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Lal9g0112 1230 Pfam AIG1 family 599 732 IPR006703 GO:0005525
Lal9g0112 1230 Pfam Translocase of chloroplast 159/132, membrane anchor domain 957 1220 IPR024283 -
Lal9g0112 1230 MobiDBLite consensus disorder prediction 311 334 - -
Lal9g0112 1230 MobiDBLite consensus disorder prediction 202 219 - -
Lal9g0112 1230 MobiDBLite consensus disorder prediction 857 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0112 Lal-Chr9 725423 729115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0112 - - lang:109355509 2101.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0112 9 725423 729115 Lal9g0112 9 725423 729115 ECH
Lal1g0142 1 932869 936534 Lal9g0112 9 725423 729115 LSH