Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0089 ATGGCTTCCTTCAATCACTTTTGGATATTCTCTGTCGCTCTTCTCCTTCTCGCTTCTCCTCTTCTACAAGTTGCTAGGTGCCACTCAGAATCAGATGAAGCAGCGCAAACCACTGAAGAAGCAAGTGATATTGGTGTTGTTGGTGATGATGTCCAAGATTTCAGTGATGAGACCTTCGATTCAGCTCCAGAAATAGATACAATCTGTTTGTTTCCAAAAAATAGCGCAAAATTGGTAACAGCTGGAGAGGAGACAGAGCTTCTTGTCGGTGTAAAAAATGATGGGGAGTCGAGCTTGAAAGTTATTGCAATTAAGGCTAGTGTTCACCTTGCCTTCGATCATCGTATACTTGTTCAAAATCTTACTACTCAGGTTTTCAACAATGGTAAAGTTCCAGCCACAGCACAGGCTACTTTCCCATATTTATTTGCTGTCAGCAAGTTCTTGCAGCCTGGAAATTTTGATCTTGTTGGCACCATTGTGTATGAGATAGATCAGCAACCATACCAAAGCACTTTCTACAATGGCACAATTGAAGTTGTTGAGGCTGGTGCCTTTCTCAGCATAGAATCTGTTTTTCTTGTTACTCTCGGAGCTGCTCTCCTTGCCCTCCTTGGGATATGGATTCATGGTCAAATACAAAACCTATCCAAGAAAACAAAGAGGGCTCCCAAAGTTGAAGTTGGAACTAGGAGTACAGATGCGTCCTTGGATGAGTGGCTCCAGGGAACTGCATATACTCAGTCTCAGGCGAACAAATCAAAGAAGAAGAAATAG 777 0.426 MASFNHFWIFSVALLLLASPLLQVARCHSESDEAAQTTEEASDIGVVGDDVQDFSDETFDSAPEIDTICLFPKNSAKLVTAGEETELLVGVKNDGESSLKVIAIKASVHLAFDHRILVQNLTTQVFNNGKVPATAQATFPYLFAVSKFLQPGNFDLVGTIVYEIDQQPYQSTFYNGTIEVVEAGAFLSIESVFLVTLGAALLALLGIWIHGQIQNLSKKTKRAPKVEVGTRSTDASLDEWLQGTAYTQSQANKSKKKK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0089 258 Pfam Translocon-associated protein (TRAP), alpha subunit 20 245 IPR005595 GO:0005789
Lal9g0089 258 PANTHER - 5 258 - -
Lal9g0089 258 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT 5 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0089 Lal-Chr9 564275 567889 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0089 K13249 - gmx:100820543 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0089 9 564275 567889 Lal9g0089 9 564275 567889 ECH
Lal2g0064 2 355592 365169 Lal9g0089 9 564275 567889 LSH