LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal9g0080	ATGGATAAGCTGCTCGCAAAATCTTCTTTGTCAAAGGATGATTCAACCAGTGATTCGAAAAACAGTAAAAGGTTCAAGAATCATCATATGCTTGCCCCTTTCACACCTGGGCGAGAGACTAATCCTGTAGTTATAGACAAGTCAGAGGGATGCTATATATATGACATTGATGGGAATAAATATCTTGATGCACTTGCTGGCCTATGGTGCACCAGTTTAGGAGGAAGTGAGTCTCGCCTTGTTGAAGCAGCCACTGCACAATTAAAGAAGCTGCCATTTTACCATTCCTTTGTGAACAGGACTACTGAACCTTCTTTGGTTCTAGCCAAGGATCTCATAGAAATGTTCACACCTAGAAAAATGGGGAAAGCTTTTTTTGTTAATAGTGGATCAGAAGCCAATGACACTATGGTCAAATTTGCATGGTATTACTACAATGCACTTGGACAACCAAATAAGAAAAAGTTTATAGCTCGTGATAGATCGTACGCATGCCATCTCAACTTGTGGTATCATGGTACAACAGTGGCATCGTCTAGTCTTTCTGGGTACGATGCATTAAAGAATATTTTCAGTAAACTAGTGCTTATTAGAACAGTTTTATGTTATTTACACCTTCCAACTATGCATAAAAAGTTTAATCTGCCACTTCCATTTGTCTTGCACACTAATTGTCCACATTACTGGCGGTATCATCTTCCAGGGGAAACAGAAGAAGAGTATTCAACACGGTTAGCCAACAATTTGTTGGAGCTCATTCTAAAAGAGGGACCAGACACAATTGCTGCATTTATTGCTGAACCATTAATAGGGGCAGGTGGTGTGATACCTCCACCTGCAACTTATTTTGAAAAGATCCAAGCAGTTCTCAAGAAATATGACATTCTTTTTATTGTGGATGAGGTAATATGTGGCTTTGGAAGACTTGGGACAATGTTTGGGTGTGACAAGTACAACATCAAGCCAGATCTTGTCTCCTTAGCTAAGGGACTTTCTTCTGCATATTTGCCAATTGGAGCCGTTCTTGTGAGCCCAGAAGTTTCAGAAGTTATAGACTCACAAAGTACCGAAATTGGTGGATTTTTTCACGGCTTTACTTATTCTGGACATCCCGTTGCAAGTGCCCTTGCAATTGAAGCACTCAAGATCTACAAGGAAATAAATATTGTGGACAAAGTAAACAAAATTTCGCCAAAGTTCCAAGATGGCCTAAAAGCATTTTCTGATAGTCCTATAGTTGGAGAGGTACGAGGAACCGGCTTGGTTATAGGAATTGAGTTTACAAAAAATAAGTCACCTAATGATTTCTTCCCTCGGGTAGGTGCCTATTTTTCAGCACAATGTGAGAAGAATGGGTTGATAGTTCGTGCGGCTGGAGAACTGATCATGATGTGTCCACCATTAATTATTTCCCCACAAGAAGTTGATGAGTTAATCAGAATTTTTGGGAAAGCACTAAAAGCTACAGAAGAGAGGGTGCAAGAGCTCGAGTCTCAGCTTCAGTAG	1506	0.4017	MDKLLAKSSLSKDDSTSDSKNSKRFKNHHMLAPFTPGRETNPVVIDKSEGCYIYDIDGNKYLDALAGLWCTSLGGSESRLVEAATAQLKKLPFYHSFVNRTTEPSLVLAKDLIEMFTPRKMGKAFFVNSGSEANDTMVKFAWYYYNALGQPNKKKFIARDRSYACHLNLWYHGTTVASSSLSGYDALKNIFSKLVLIRTVLCYLHLPTMHKKFNLPLPFVLHTNCPHYWRYHLPGETEEEYSTRLANNLLELILKEGPDTIAAFIAEPLIGAGGVIPPPATYFEKIQAVLKKYDILFIVDEVICGFGRLGTMFGCDKYNIKPDLVSLAKGLSSAYLPIGAVLVSPEVSEVIDSQSTEIGGFFHGFTYSGHPVASALAIEALKIYKEINIVDKVNKISPKFQDGLKAFSDSPIVGEVRGTGLVIGIEFTKNKSPNDFFPRVGAYFSAQCEKNGLIVRAAGELIMMCPPLIISPQEVDELIRIFGKALKATEERVQELESQLQ	501

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal9g0080	501	Pfam	Aminotransferase class-III	40	486	IPR005814	GO:0008483\|GO:0030170
	Lal9g0080	501	Coils	Coil	479	501	-	-
	Lal9g0080	501	PANTHER	ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE	18	191	-	-
	Lal9g0080	501	PANTHER	ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE	205	496	-	-
	Lal9g0080	501	SUPERFAMILY	PLP-dependent transferases	29	487	IPR015424	-
	Lal9g0080	501	Gene3D	Aspartate Aminotransferase, domain 1	43	486	IPR015422	GO:0003824
	Lal9g0080	501	Gene3D	-	77	389	IPR015421	GO:0003824
	Lal9g0080	501	PANTHER	GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL	18	191	-	-
	Lal9g0080	501	PANTHER	GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL	205	496	-	-
	Lal9g0080	501	ProSitePatterns	Aminotransferases class-III pyridoxal-phosphate attachment site.	297	334	IPR005814	GO:0008483\|GO:0030170
	Lal9g0080	501	CDD	OAT_like	23	486	IPR005814	GO:0008483\|GO:0030170
	Lal9g0080	501	MobiDBLite	consensus disorder prediction	1	23	-	-
	Lal9g0080	501	PIRSF	Transaminase_4ab_Lys_Orn	222	489	IPR005814	GO:0008483\|GO:0030170
	Lal9g0080	501	PIRSF	Transaminase_4ab_Lys_Orn	9	169	IPR005814	GO:0008483\|GO:0030170

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal9g0080	Lal-Chr9	516970	523173	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal9g0080	K16871		-	gmx:100815181	706.057

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal9g0080	9	516970	523173	Lal9g0080	9	516970	523173	ECH