Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0047 ATGTCTCTATTCCTTCGCTTCTCTCCTCACCATCTTTCTCTTTCAACCTCAACATCTCTTCTCTTTCCAATTTTACCCTCTTCCTCTTCTTATTCTTTCCCTTCTCAATCACCAACCCCCCACATCACTTTTTCCCGCTACAGGCGCAGAGGTAACTCTACTCGATTTGGGCACTTCAAAGTTTGCCCCTTTTCCACCATTGGAGTCAACGGGGATGCACCATATGACGGTGAGAATCCAGAGGAAAAAGAAGACGAAGACGACTATGGTGTTGTCCAAATAAGAGCTAGTGGTGGGGATGGACCAGAGGAAGAAGAAGAAGAAGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGCGCTATTGTCACTTCACTAGTTTTGCCTGAAAGATGGGATGTATTGGGTCTTGGTCAAGCCATGGTAGACTTCTCTGGCACAGTTGATGATGAGTTCCTGAAGAAATTGGGATTAGAAAAGGGAACACGGAAAGTTGTAAATCATGAGGAAAGAGGTAGGGTTTTGCAGGCTATGGATGGTTGCAGCTACAAAGCTGCAGCTGGTGGATCTCTTTCTAATACTTTAGTTGCTCTCGCTAGACTTGGCCTTCGTTCCATTGGAGCTACAGCCATAAATGTTGCAATGACTGGCAGTGTAGGGAGTGATCTTTTGGGTAGCTTCTACAGGGAAAAATTACGCCGAGCAAATGTGCAATTTCTTTCTGAGCCTATCAAGGATGGGACAACTGGAACAGTTATAGTTCTCACCACTCCAGATGCCCAACGTACAATGCTTGCATATCAGGGCACATCTTCAACTGTTAACTACGACATATCCTTGTCTAGTGCAGTTTCCAAGACCAACATACTTGTTGTTGAAGGATATCTATTTGAACTTCCTGATACTATTAAAACAATAACAAAAGCATGTGAGGTAGCTCGGACAAATGGTGCCTTGGTTGCAATAACCGCTTCAGATGTCTCTTGCATCGAGAGACACTTGGATGATTTCTGGGAAATTCTCGGGAATCATGCAGATTTAATCTTTGCAAATGGCGACGAAGCTAAAGCACTTTGTAATTTTAATGAAAATGAAAGCTCAGCTGCAGCTGCAAGGTATCTGAGCCATTTTGTTCCTCTAGTATCTGTCACAGATGGTCCTAAAGGGTCTTACATAGGTATAAAAGGTGAAGCTGTATACATCCCTCCTTCTCCATGTGTTCCAGTAGATACTTGCGGTGCTGGTGATGCATATGCATCTGGTGTGCTATATGGTGTTCTAAGGGGTATATCAGATTTGAAAAGTATAGGTACAATAGCAGCTAAGGTTGCAGCCACTGTTGTTGGGCAACAAGGGACTAGGCTTAGAATTTCAGATGCAGTCAAATTAGCTGAATCCTTTGCATTTCAACTTGATACAACAACCCTTCATTCTGATGTTGCCACTGATCATATTTCAAGCATCCAGTCAGATGGCACTTTACATTGA 1500 0.4307 MSLFLRFSPHHLSLSTSTSLLFPILPSSSSYSFPSQSPTPHITFSRYRRRGNSTRFGHFKVCPFSTIGVNGDAPYDGENPEEKEDEDDYGVVQIRASGGDGPEEEEEEEEEEEEEEEEEEEEEGAIVTSLVLPERWDVLGLGQAMVDFSGTVDDEFLKKLGLEKGTRKVVNHEERGRVLQAMDGCSYKAAAGGSLSNTLVALARLGLRSIGATAINVAMTGSVGSDLLGSFYREKLRRANVQFLSEPIKDGTTGTVIVLTTPDAQRTMLAYQGTSSTVNYDISLSSAVSKTNILVVEGYLFELPDTIKTITKACEVARTNGALVAITASDVSCIERHLDDFWEILGNHADLIFANGDEAKALCNFNENESSAAAARYLSHFVPLVSVTDGPKGSYIGIKGEAVYIPPSPCVPVDTCGAGDAYASGVLYGVLRGISDLKSIGTIAAKVAATVVGQQGTRLRISDAVKLAESFAFQLDTTTLHSDVATDHISSIQSDGTLH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0047 499 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 414 427 IPR002173 GO:0016773
Lal9g0047 499 MobiDBLite consensus disorder prediction 101 125 - -
Lal9g0047 499 SUPERFAMILY Ribokinase-like 136 459 IPR029056 -
Lal9g0047 499 CDD adenosine_kinase 135 460 - -
Lal9g0047 499 PANTHER HEXOKINASE FAMILY MEMBER 105 482 - -
Lal9g0047 499 Coils Coil 101 125 - -
Lal9g0047 499 MobiDBLite consensus disorder prediction 70 125 - -
Lal9g0047 499 Gene3D - 132 466 IPR029056 -
Lal9g0047 499 PANTHER KINASE, PUTATIVE, EXPRESSED-RELATED 105 482 - -
Lal9g0047 499 Pfam pfkB family carbohydrate kinase 187 459 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0047 Lal-Chr9 293640 297605 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0047 - - lang:109355577 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0047 9 293640 297605 Lal9g0047 9 293640 297605 ECH