Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0025 ATGCCATTTCACGTAGCTTGTCCAATTACATGTCGCCGAATCTGTTTCTGCGCTTTAGGGTTTCCGACCTCTCTTCACAACAATGCCTTTCTCAATCATCTCACCGCTCTTCGTCAATTCCTCGCCGCCGATACTCCCACTCACATCGCCACCGTCCAGGTCACCGTCCCCAAGATCTTACCGTCACCTCTTGGAGTTCCACCTTGCGCTGATGTTTTCGATGAGTCCGCATCCATGAAAGCGAAACGTGTCGCTCTTCAGCGAAAAGGCGCCGCCGCTATGCTTGCTGCCGAGGAGTTTGCTCGCCAGTTAGAGTCCAGTGGCGGTGACGTTGCCGATACATCAGGAAATATTAGTGGAGAAGAACTGGGTCAATCTAACATGAAAGTTTTTTGTCGAATGTGCAATCGGGTTGAAAATGATGGAAGCGAGACAGCAAAAAAGATGCTATCATGTAAAAGTTGTAGCAAGAAATACCATAGGAACTGCTTGAGAAGTTGGGCTCATAATAGAGATTTATTTCATTGGAGTTCATGGACCTGTCGCGCTTGCCGAATTTGTGAGAGGTTGCCATTTTCCAATAATGTTTCATTAGAATCAAGTCACTCTTATGCTTTATCAGCTCTTATCCAGGCTTGCAGAAGGACCGGTGATCCAAGTAAGTTCATGTTTTGCAAAAGATGTGATGGCGCTTACCATTGCTATTGTCTTCAACCTCCTCACAAGAATGTTAGTACTGGGCCCTATTTGTGCCCAAAGCACACAAGGTGTCACAGTTGCGGATCGAATGTCCCTGGAAATGGACTTAGTGTGAGGTGGTTTCTGGGATACACCTGCTGTGATGCATGCGGAAGATTGTTTGTGAAAGGAAACTACTGCTCTGTTTGTTTGAAGGTGACAGTCTTTTCTCTTGATGTTTTCCTAATCTGCATTTGGGGGATGGTATACAGAGATTCAGAGTCGACACCAATGGTTTGCTGTGATGTTTGCCAGCGCTGGGTTCATTGCCATTGTGATAATATTAGTGATGAAAAATATCATCAATTTCAAGTGGATGGGAATCTGCAGTATAAATGTCCCACATGTCGTGGGGAATGTCATCAGATCCAGGGTCTTGATGAAGCTGTTCAAGAGCTTTGGAGGAGAAGGAATATTAACGATAGAGATTTAATTGTCAGCTTGAGGGCTGCAGCTGGTTTACCAACTCAAGATGAAATATTTTCTATTTCACCATTTTCATACGATGAGGATATTAGCAAGTCTTTAAAATTAAAGAGTGAATCTGGGCGTTCCTTTAAGTTCTCTCTAAAGAATTTGTCTAATCACACACCAAAGAAGAAAGATTATGGAAAGAAATCTTCAAGCAAAAAGACTGCTAAGAAAAAGGACCCTCAGTCATTTGTGTCTGGTAAAATTGACACACGCCATAGTTTTGAAGGGCATAGTGATACCAGATCCTTACATAGTTTGGATGATGATGATATACAATCCCTGAGAAATGATGGTCATGATGTTTATTCATCACCTGCTGAAATATTTTGCCCTACCAACAAGCCAGGTATTTCAAAACATAAGTTTGTTGATGAGGTGATGGTCGGTGATGAAGAGAGGAGACCCAGAGTTGTTCGAATTAAAAGCAATAAGGCACATATTATGAATGGTGAAGAGGAGAGTGGAAAGCATGATGATAAAACTCAGAATGTGAAAGGGAAGAAGTTGGTTATAAATTTGGGTGCGCGGAAAATTAATGTGGCTAGTTCTCTGCGGTCTGATACTTCAAGCTGCCAAAGAGATCAAGATCTGGTTAATGTTAATGGAAATGAATACATAAGCCAGTTAAGGAAGCAAGACAAGTTTGCATTAGACAGACAAGATGCTGCAGCTAGACATATTGATGGAAACAGAGTTGACTCTGGCCAAGCAAAGCTTTTAAAGGTTTCAGGAAGCGAAAGAAAATTGATTAAATTGGGAAAGGTGAAACCAGAAGTTTCTGACTTTAATACGGCCTCTGGTAGAGGGAATATTTCTGATGGAAGTTTAGAGTGTACTCATGCCTTGCAGAGCAAACATAGTACTGATGGAATGTTTGATCAAGTAGGAACAGTAGAAGCTACTTCACGAGGTGAAGGGACATATGGGGAGACAGATGGAAATAATAATAATAGTCTTGCACCTTCACATTCTTTGCCAAAAGATTCTAAACCTCTACTGAGATTTAAATTGAAGAAACCTAGCATTGAAAGTCTAAATTCTCCTCATCAGGAGAAGACTATAATCAAGGGCCAGAGATCGAAAAGGAAGAGACCAACACCTTTTAAGGAGAAAAAGTTGTTTAATGAGGCTGAAAATGTAAGTCAATCACATCAAGACTGTCAAATGGATGAGATCATGGCTGCAAACTGGATATTGATGAAATTGGGTAATGATGCAGTTGGGAAGAGAGTTGAAGTTCATCAGACATCTGACAATTCTTGGCACAAGGGAGTGGTTTCCGATACAGTGGAAGGCACCTCAAAGGTACACGTTACCTTAGATGTTGGGAAGGTGAAGATGCTAGAACTCAGGAACCAAGGGGTCCGTTTTGTTCCACAAAAGCAGAAGCGATCGAAGACATGA 2616 0.4182 MPFHVACPITCRRICFCALGFPTSLHNNAFLNHLTALRQFLAADTPTHIATVQVTVPKILPSPLGVPPCADVFDESASMKAKRVALQRKGAAAMLAAEEFARQLESSGGDVADTSGNISGEELGQSNMKVFCRMCNRVENDGSETAKKMLSCKSCSKKYHRNCLRSWAHNRDLFHWSSWTCRACRICERLPFSNNVSLESSHSYALSALIQACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSTGPYLCPKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCSVCLKVTVFSLDVFLICIWGMVYRDSESTPMVCCDVCQRWVHCHCDNISDEKYHQFQVDGNLQYKCPTCRGECHQIQGLDEAVQELWRRRNINDRDLIVSLRAAAGLPTQDEIFSISPFSYDEDISKSLKLKSESGRSFKFSLKNLSNHTPKKKDYGKKSSSKKTAKKKDPQSFVSGKIDTRHSFEGHSDTRSLHSLDDDDIQSLRNDGHDVYSSPAEIFCPTNKPGISKHKFVDEVMVGDEERRPRVVRIKSNKAHIMNGEEESGKHDDKTQNVKGKKLVINLGARKINVASSLRSDTSSCQRDQDLVNVNGNEYISQLRKQDKFALDRQDAAARHIDGNRVDSGQAKLLKVSGSERKLIKLGKVKPEVSDFNTASGRGNISDGSLECTHALQSKHSTDGMFDQVGTVEATSRGEGTYGETDGNNNNSLAPSHSLPKDSKPLLRFKLKKPSIESLNSPHQEKTIIKGQRSKRKRPTPFKEKKLFNEAENVSQSHQDCQMDEIMAANWILMKLGNDAVGKRVEVHQTSDNSWHKGVVSDTVEGTSKVHVTLDVGKVKMLELRNQGVRFVPQKQKRSKT 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0025 871 SUPERFAMILY FYVE/PHD zinc finger 127 188 IPR011011 -
Lal9g0025 871 MobiDBLite consensus disorder prediction 442 495 - -
Lal9g0025 871 MobiDBLite consensus disorder prediction 459 495 - -
Lal9g0025 871 ProSiteProfiles Zinc finger PHD-type profile. 129 187 IPR019787 -
Lal9g0025 871 MobiDBLite consensus disorder prediction 707 732 - -
Lal9g0025 871 SMART PHD_3 212 255 IPR001965 -
Lal9g0025 871 SMART PHD_3 292 363 IPR001965 -
Lal9g0025 871 SMART PHD_3 131 185 IPR001965 -
Lal9g0025 871 ProSiteProfiles Zinc finger PHD-type profile. 290 365 IPR019787 -
Lal9g0025 871 SUPERFAMILY FYVE/PHD zinc finger 212 260 IPR011011 -
Lal9g0025 871 MobiDBLite consensus disorder prediction 711 728 - -
Lal9g0025 871 ProSitePatterns Zinc finger PHD-type signature. 132 184 IPR019786 -
Lal9g0025 871 PANTHER PHD FINGER FAMILY PROTEIN 2 190 - -
Lal9g0025 871 PANTHER PHD FINGER FAMILY PROTEIN 212 865 - -
Lal9g0025 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 186 IPR013083 -
Lal9g0025 871 PANTHER HISTONE ACETYLTRANSFERASE 212 865 - -
Lal9g0025 871 PANTHER HISTONE ACETYLTRANSFERASE 2 190 - -
Lal9g0025 871 CDD PHD_SF 131 184 - -
Lal9g0025 871 SUPERFAMILY FYVE/PHD zinc finger 319 367 IPR011011 -
Lal9g0025 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 365 IPR013083 -
Lal9g0025 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 198 256 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0025 Lal-Chr9 133960 141452 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0025 - - gmx:100815407 1194.87