Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0007 ATGATGAACAAGCTGATGGTGGAAGTTGTTGATGCTATTGACCTGAAGCCAGTAGATGGAGAAGGTTCAGCCAGCCCTTTTGTTGAGGTTGTTTTTGATGACCAACAACAAAGGACAGAAACAAAACACAAAGACCTCAATCCTTATTGGAATCACAAGTTAGTGTTCAACATTAATAACCCAACACACCTTCCTCACAAGACTATTCAAGTGGCTGTTCACAATGATAGAAAACTTGGTCACCGCAAAAAGTGCCTTGGAAGGGTCATCATTTCAGGTCATGTTGTCCCTCTTTCTCAGTCTGAGTCTGCTGTCAGACGCTACCCTCTTGAGCAACGTGCTTTATTCTCAGATCCCAAAGGAGAGATTGATCTTAGAATCTATGCTTTTTATGATCCTTCTACTACTAATACTAACACTAATACTCCAAAACTACATCCACAACCGCAGCCATATGATGGTGAGGAGACTCCTTTGCAAGAAATAAACACTAATAACAAGCTAGATGACCAAGAAACCATGGTTGCTGATTTTGAGAAAAGGAAAAAGGGAAAGAAAACAGAAAAGGAAGTTAGAACTTTTCATTCCATAGGAGCAGAGAAAACCACTTCTCCTACTCCTCCTCCCCCTTTTTCCTTTACTAGGCCTCCTTTTCCTACAGCAGCAGCAGCAGCAGGTAGGCCTTTTTCTCAGCCAGCCTCAGTTGAAATGAGGGCCGATTTTGCAAAAGCGGGGCCACCAAATGCAATGTTAATGCAGATCCCAAAGCAAAACCCTGAGTATGCATTGGTGGAGACAAGTCCACCACTCGCAGCTCGATCGCATTATAGAGGATGGAACAAGGTATCAACCACCTATGATTTAGTGGAACAGATGCATTACTTGTATGTCAATGTGGTGAAGGCAAAGGAACTTCCAGTCATGGATATCTCTGGAAGCCTTGACCCTTATGTGGAAGTCAAGCTTGGTAACTACAAAGGTGTCACAAAGCATTTGGAGAAGAATCAGCACCCCGTTTGGAAGCAGATTTTTGCTTTCTCCAAGGAAAGGTTGCAATCGAATTTGCTGGAAGTGACTGTGAAGGATAAGGATATAGGGAAAGATGATTTTGTGGGTAGAGTTATGTTTGATCTTACAGAGGTTCCTGTTAGGGTACCCCCAGATAGTCCATTGGCACCTCAATGGTACAGGTTGGAGAATAAGAAAGGGCAGAAAGTTAACAATGGAGAAATCATGCTTGCAGTTTGGATGGGAACACAAGCTGATGAGTCCTTTCCAGAGGCCTGGCATTCTGATGCTCATAATGTCAGTCACTCGAACCTTTCAAATACACGATCCAAGGTATATTTCACACCAAAGCTTTACTATCTTAGAGTTCAAGTAATTGAAGCTCAAGATCTTGTCCCTTCTGAGAAAGGTAGAGCTCCAGATGCAGTAGTGAGGGTACAGCTTGGGAATCAAATGAGATACACAGGGCCTTCTCCAATGAGAGGCACTACTAGCCCAATTTGGAATGATGAGCTTATGTTTGTGGCAGCTGAACCATTTGAGGATTTCATCATTGTGACAGTCGAAGACAAAGTAGGTCCTAGCAATGTAGAAATATTAGGAAGGGAGATTTTGTCAGTGAGAAGTGTTCCACTCAAACACGAGACCGGCAAGCTCCCTGATGCGCGTTGGTACAATCTGCATAGGCCTTCTGCTGTTGGTGAAGAAGAAACAGAGAAGAAGAAGGATAAATTCTCAAGCAAGATTCACCTCCGAATTGTTCTTGAGGCTGGCTATCATGTGCTTGATGAATCCACACACTTTAGCAGTGATCTTCAGCCATCATCCAAACATTTAAGGAAGAAGAACATTGGAATTCTCGAACTTGGGATACTGAGTGCCCGCAATTTGCTACCTATGAAGGCCAGAGAAAGTAGAACTACGGATGCATACTGTGTGGCCAAGTATGGCAACAAGTGGGTTCGAACCAGAACTCTGCTTGATACCTTGTCCCCTCGATGGAATGAGCAATATACTTGGGAAGTTCATGATCCATGCACTGTTATCACAGTTGGGGTGTTTGACAATTGCCACATCAATGGGAGCAGTGACAGTAGAGACCAGAGGATTGGAAAGAAAAATGGAGAGCTTCACTTGGCAGTGAGATTCACTTGCACAGCATGGGTTAATATGGTAGCTCAGTATGGAAGGCCTTTGCTTCCTAAAATGCACTATGTCCAACCTATTCCTGTCAGGCACATAGATTGGCTCCGCCACCAGGCCATGCAGATTGTGGCGGGACGACTAGCAAGGGCTGAGCCACCACTTAGACGGGAAGCAGTTGAGTATATGCTTGATGTAGATTACCATATGTGGAGTCTTAGGAGAAGCAAAGCCAATTTTCAACGCATTATGTCACTCCTCTCTGGAGTTACTGCTGTGTGTAAATGGTTTAATGACATTTCCACTTGGAGAAACCCCATAACAACTTGCCTTGTTCATGTCTTGTTCTTGATACTCGTTTGCTACCCAGAACTGATCCTGCCCACCATTTTCCTTTACCTGTTTGTAATTGGGATTTGGAACTACCGGTTCAGGCCAAGGCATCCACCCTACATGGATGCTAGGCTTTCACAAGCAGAAACAGCTCACCCTGATGAATTGGATGAGGAATTTGACACTTTTCCAACGACCAAACCTTCAGATATTGTGAGGATGAGGTATGACAGATTGCGGAGCGTTGCAGGTAGAGTACAGACAGTGGCTGGAGATTTGGCTACTCAAGGTGAGAGAGCTCAAGCCATTCTAAGTTGGAGAGATCCAAGGGCCACAGCTATCTTCATCATCTTCTCACTTTTCTGGGCTGTCTTCATTTATGTTACTCCATTCCAAGTAGTGGCAATTCTAGTGGGTCTCTACATGCTGCGTCACCCTCGGTTTAGGAGCAAGATGCCATCTGTGCCAGTTAATTTCTTCAAGAGATTGCCTTCTAAATCAGATTTGCTGCTGTGA 3000 0.4417 MMNKLMVEVVDAIDLKPVDGEGSASPFVEVVFDDQQQRTETKHKDLNPYWNHKLVFNINNPTHLPHKTIQVAVHNDRKLGHRKKCLGRVIISGHVVPLSQSESAVRRYPLEQRALFSDPKGEIDLRIYAFYDPSTTNTNTNTPKLHPQPQPYDGEETPLQEINTNNKLDDQETMVADFEKRKKGKKTEKEVRTFHSIGAEKTTSPTPPPPFSFTRPPFPTAAAAAGRPFSQPASVEMRADFAKAGPPNAMLMQIPKQNPEYALVETSPPLAARSHYRGWNKVSTTYDLVEQMHYLYVNVVKAKELPVMDISGSLDPYVEVKLGNYKGVTKHLEKNQHPVWKQIFAFSKERLQSNLLEVTVKDKDIGKDDFVGRVMFDLTEVPVRVPPDSPLAPQWYRLENKKGQKVNNGEIMLAVWMGTQADESFPEAWHSDAHNVSHSNLSNTRSKVYFTPKLYYLRVQVIEAQDLVPSEKGRAPDAVVRVQLGNQMRYTGPSPMRGTTSPIWNDELMFVAAEPFEDFIIVTVEDKVGPSNVEILGREILSVRSVPLKHETGKLPDARWYNLHRPSAVGEEETEKKKDKFSSKIHLRIVLEAGYHVLDESTHFSSDLQPSSKHLRKKNIGILELGILSARNLLPMKARESRTTDAYCVAKYGNKWVRTRTLLDTLSPRWNEQYTWEVHDPCTVITVGVFDNCHINGSSDSRDQRIGKKNGELHLAVRFTCTAWVNMVAQYGRPLLPKMHYVQPIPVRHIDWLRHQAMQIVAGRLARAEPPLRREAVEYMLDVDYHMWSLRRSKANFQRIMSLLSGVTAVCKWFNDISTWRNPITTCLVHVLFLILVCYPELILPTIFLYLFVIGIWNYRFRPRHPPYMDARLSQAETAHPDELDEEFDTFPTTKPSDIVRMRYDRLRSVAGRVQTVAGDLATQGERAQAILSWRDPRATAIFIIFSLFWAVFIYVTPFQVVAILVGLYMLRHPRFRSKMPSVPVNFFKRLPSKSDLLL 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0007 999 Gene3D C2 domain 2 151 IPR035892 -
Lal9g0007 999 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 455 612 IPR035892 -
Lal9g0007 999 PANTHER BNAA09G30540D PROTEIN 2 708 - -
Lal9g0007 999 PANTHER BNAA09G30540D PROTEIN 708 999 - -
Lal9g0007 999 Gene3D C2 domain 598 730 IPR035892 -
Lal9g0007 999 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Lal9g0007 999 CDD C2C_MCTP_PRT_plant 456 610 - -
Lal9g0007 999 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 131 IPR035892 -
Lal9g0007 999 Gene3D C2 domain 282 418 IPR035892 -
Lal9g0007 999 Pfam Plant phosphoribosyltransferase C-terminal 844 999 IPR013583 -
Lal9g0007 999 SMART C2_3c 294 390 IPR000008 -
Lal9g0007 999 SMART C2_3c 456 555 IPR000008 -
Lal9g0007 999 SMART C2_3c 622 736 IPR000008 -
Lal9g0007 999 SMART C2_3c 4 110 IPR000008 -
Lal9g0007 999 Gene3D C2 domain 438 591 IPR035892 -
Lal9g0007 999 CDD C2B_MCTP_PRT_plant 294 419 - -
Lal9g0007 999 ProSiteProfiles C2 domain profile. 604 725 IPR000008 -
Lal9g0007 999 ProSiteProfiles C2 domain profile. 276 396 IPR000008 -
Lal9g0007 999 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 294 433 IPR035892 -
Lal9g0007 999 Pfam C2 domain 4 108 IPR000008 -
Lal9g0007 999 Pfam C2 domain 621 708 IPR000008 -
Lal9g0007 999 Pfam C2 domain 456 562 IPR000008 -
Lal9g0007 999 Pfam C2 domain 294 396 IPR000008 -
Lal9g0007 999 ProSiteProfiles C2 domain profile. 435 561 IPR000008 -
Lal9g0007 999 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 621 725 IPR035892 -
Lal9g0007 999 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 2 708 - -
Lal9g0007 999 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 708 999 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0007 Lal-Chr9 41840 46143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0007 2 999 Lipid Metabolism Gene Families AT1G22610 68.744 0.0 1420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0007 - - gmx:100778133 1593.17