Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1573 ATGGCTTCCCCTGAAGAAGATAAGGGGCTTCATCAGAAGCTTCTAGAAGCTGCTAACAACCTCCTTCATCCTCCTTCCTCTATTCACGACCTTCTCCCTCTTCTTCAACAAGTTGAGAGTTGCTTAGAATTGGTTGATCAGTCACCTACCGGATCTGTCCAAGCTGCAATGGCTCCATTGGCGGTTGCTTTAATTGGTGAAAATCTTTTGAGGCACGTGGATGTTGACGTGAAAGTTGTCCTTGCATCTTGTATCAGTGAGATAACAAGAATCTCTGCACCTGAAGCTCCATTAGATGATGACCAAATGAAGAAGGCGTTTCAGTTAATTGTATCTTCGTTTGAAAATCTACATGATATTTCCAGTCGATCATATAGAAAGAGGACTGGGATTCTTGAAACGGTTTCAAAAGTCAGGTCATGTGTGGTAATGCTGGATCTTGAATGTGATGACCTGATTTTGGAGATGTTTCAGCATTTTTTGAAGGAAATAAGGGAGCATCATCCAGAGCAAGTTTTTTCAGCCATGCAAAACATAATGACTCTTGTTCTAGAGGAAAGTGAAGATATATCCCTAAACTTACTCTCTCCAATCTTGGACAGCATAAAGAAAGAAAATGAGGAAGTTTTGCCAATTGCTAAAAAATTGGTGGAGAATGTCCTTGCAAGTTGTGCAACCAAGATTAAACCTTACTTGGTGCAAGCAGTGAGTACTTTGGGTATTTCTTTGGATGATTACAGTAATATTCTCACTTCAATATGTCATGACGGATCTGGAAACTTGGAACAAAATGATATACATGCTATTAGTGAGCATGTGGAAGACGAGAGCAAATCAGTGGAAGAGTCACTGGAGGAGTCAGCACCGGTGATTGGAGAGGATGCAGAAGAAGCTGCACCACCTCAACAAGATAATCCAGTTGGTGACCGTTCTCCTAAATCAGTCATGAGCAATGACAATCCACAGGCTGCAGAAGATGACACTTTGGTAGAGTCAAAGTCCCCAGAAAAGCAAGAAAATACTGATTGCACTATTCAGTCCAAAGGTATTAGTTTTTCAGCTAATGAGGATCCCACCAACTTGGACACTGAAAAAGTTGACAATAGTGATCAAAAACAAGATCAGGCCACTAAGAAGAGAGCAAGGAAAAGTATCCCTTCTTCAAAATCACTAGAACCTTCTGAGGGTTCATATCCCGCTAATGTGAAGGAAGATGAGAAGGTGGCTGACTCTGAAAGTCATAGCAAGGAAGATGAGACAGTGATTGACTCTGAAAGTCATAGCAAGGAAGATGAGAAAGTGGTTTCCTCTGAAGGTCATAGCAAGGAAGATGAGATAGTGGTCGACTCTGAAAGTCATAGCAAGGAAGATGAGAAAGTGGTTGCCTCTGAAAGTCATAGCAAGGAAGATGACAATAGTGATCAAAAGCAAGGTGAAGCTAGAAAGAGCGAAGGAAAAAAACCTGTCTCTTCAACAAAACCTGCAGAACTTTCCAAGGGTTCATGTCCTGATAATGTGAAGGAAGGTGAGAAAGTAATTGACTCTGAAAGTCACAGCAATAAAGATGTCAATAGTAATCAAAAGCAAGGTGAATCCACTAAGAAGATAGGAAGCCAACCTACCTTTTCAACAAAATCGGCAGAACCTCCCAAGGTTTCATATCCTGCTAATGTGAAGGAAGTTGAGAAAGTGGCCGACTCTGAGAGTCATAGCAAGGAAAATGAGAGAATGATTGACTCTGAAAGTCCTAGCAAGAAAGATGACATTAATGATCAAAAGAAAGGTCAAGTCACCAAGAAGAGAGGAAAAAGGAAACCTATTTCTTCTACAAAATCGGCAGAACGTACCAAGGGTCTATATCCTGCTAAAGTGAACGAAGATGAGAAAGTGATTGACTCTGAAATTCATCACAAGGAAGATGACGATTGTGATCAAAAGCAAGGTCTACCCAGCAACAAGGTAGGAAGAAAGCCTACCTTTTCAAAAAATTCAGCACCTAATGTGAAGGAAGGTGAGAAAGTGATTGATTCTGAAAGTCATAGTAAGGAAGTTCCTAGTTCTCTACATGAAGATGGTTCTGTTGAGGCTGCAGTTATTTCAGAGAACGACAAAGATATTGATGCCAAGATTTCTACACTTAAAGCAGGTGATGGTGAATCTGACCTAGTTGCTTCTCCTTCACCAAGAGGGAGCCTCCATGTTGAAAATCCTTCAAAGAAACTTGCACGACCAAAAAAGACAGATAGTTCTGCAAAAGAAGTGGCCCTAAAAGATGTTTCAAAGAAGGTCTATCAAGGAACAAATGATTCAGAAGCAAAGCTTAACAAGCGGTCTGTAAAAAAGGCACTTGGTCGCAGTTCTGATGTGGAAAAAAGTACTTTGGTTAATTCAGTCAAAAAAGGAAATGAGACTGCAAGTGAACCTGGTGCAATAAAGCACTCAGCCAAGAAAACAGAAGATGGTAACAAGTGTGGTGTTGGGTCCGACAAGAAAAGGCAGGGGCGTGGGAAAGCCAACTCTGAGACAGTTGCAGCAAAACCTTCTGTTAAAGACGTGGTGAAGGAAATGGTGTCTTTGTCAAAGTCATCTACGAAATCAATTAAAGATGAAGATTCAGAGGAGCTTCCTAAGACAAACTTGAAGAGGAAACGCACTCCTGGAAAAGAAAATGAGTCTGGTGTCAAGAAATATGGTGAGAATCTTGTTGGTACACGAGTTAAAGTTTGGTGGCCAGATGATGACATGTTTTATAAAGGTGTTATCAAATGTTTTATTCCCTCCAAGAAGATGCACCAGGTCGCATATGATGATGGGGACATTGAAATATTAAATCTTAAAATTGAAACCTGGGAAATCATTGCAGATGGTGCTGATTCAGATGAGGAAAAAGGAGCTGATCACCCAAGTCCTGATGTGCCATCTGATATCCCCCCAAAAAAGAAAGGCAAAACTAGTACTGGTGAATCGAGGAAAGGAGGAAATAAGGATGCTTCTATAAGTGGTGGAGGAGCCACATCCAGTAAATCAAGAGGGAAATCCATGAAGTCTAGCCAGAGATCCAAAGATGGTAGCAAATCTAATCGAAAATCGAAAGCACCCAAGATTGCTGCTAGCGAGTCTGATGATGAACTCATCATCATAAAAAATAAGAATCGTACTCCCAAAAGTGGTGGCAGCGGTACATTTATAGATGCTGCTGCTCGAAAAATGAGTAGTAGCAAATCCAAGGACACTGATAAAGATGTTGATGTTGCTGCTAGCACACCAAAACTCTCTGGCAAGGCTAAGAAAGAAACCACAAAGACTGGAAAACTCAAGCAAGAAACAACATCTAAGACTGCTGCTGCTTCTGCTGCCTCCTCCTCCAAGGCAGCAAAGTCCACCAAAAGTGGTGGTGGCAAGTCTAATGCCAATGGCACTAGCAAGGTGAAGTTCAAATTATTGGAAGATTCAGATGATGAAAACATCTCAGAGGATTCAACAAAAGAGGTGGTGGAAGATACCAATGCTAAGAAATCAAGTTCATTGAAGGTTGGTGGTGGAAGTGAGGTCAAGATTGGAAAGAAACGTGCAAGAAACTAG 3582 0.4115 MASPEEDKGLHQKLLEAANNLLHPPSSIHDLLPLLQQVESCLELVDQSPTGSVQAAMAPLAVALIGENLLRHVDVDVKVVLASCISEITRISAPEAPLDDDQMKKAFQLIVSSFENLHDISSRSYRKRTGILETVSKVRSCVVMLDLECDDLILEMFQHFLKEIREHHPEQVFSAMQNIMTLVLEESEDISLNLLSPILDSIKKENEEVLPIAKKLVENVLASCATKIKPYLVQAVSTLGISLDDYSNILTSICHDGSGNLEQNDIHAISEHVEDESKSVEESLEESAPVIGEDAEEAAPPQQDNPVGDRSPKSVMSNDNPQAAEDDTLVESKSPEKQENTDCTIQSKGISFSANEDPTNLDTEKVDNSDQKQDQATKKRARKSIPSSKSLEPSEGSYPANVKEDEKVADSESHSKEDETVIDSESHSKEDEKVVSSEGHSKEDEIVVDSESHSKEDEKVVASESHSKEDDNSDQKQGEARKSEGKKPVSSTKPAELSKGSCPDNVKEGEKVIDSESHSNKDVNSNQKQGESTKKIGSQPTFSTKSAEPPKVSYPANVKEVEKVADSESHSKENERMIDSESPSKKDDINDQKKGQVTKKRGKRKPISSTKSAERTKGLYPAKVNEDEKVIDSEIHHKEDDDCDQKQGLPSNKVGRKPTFSKNSAPNVKEGEKVIDSESHSKEVPSSLHEDGSVEAAVISENDKDIDAKISTLKAGDGESDLVASPSPRGSLHVENPSKKLARPKKTDSSAKEVALKDVSKKVYQGTNDSEAKLNKRSVKKALGRSSDVEKSTLVNSVKKGNETASEPGAIKHSAKKTEDGNKCGVGSDKKRQGRGKANSETVAAKPSVKDVVKEMVSLSKSSTKSIKDEDSEELPKTNLKRKRTPGKENESGVKKYGENLVGTRVKVWWPDDDMFYKGVIKCFIPSKKMHQVAYDDGDIEILNLKIETWEIIADGADSDEEKGADHPSPDVPSDIPPKKKGKTSTGESRKGGNKDASISGGGATSSKSRGKSMKSSQRSKDGSKSNRKSKAPKIAASESDDELIIIKNKNRTPKSGGSGTFIDAAARKMSSSKSKDTDKDVDVAASTPKLSGKAKKETTKTGKLKQETTSKTAAASAASSSKAAKSTKSGGGKSNANGTSKVKFKLLEDSDDENISEDSTKEVVEDTNAKKSSSLKVGGGSEVKIGKKRARN 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1573 1193 SUPERFAMILY ARM repeat 36 261 IPR016024 -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 652 666 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 1070 1084 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 864 895 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 810 837 - -
Lal8g1573 1193 SUPERFAMILY Tudor/PWWP/MBT 900 939 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 272 895 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 503 518 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 1106 1142 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 956 990 - -
Lal8g1573 1193 PANTHER TRANSCRIPTIONAL REGULATOR 6 635 - -
Lal8g1573 1193 PANTHER TRANSCRIPTIONAL REGULATOR 624 1157 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 399 489 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 669 689 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 519 550 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 620 647 - -
Lal8g1573 1193 Gene3D - 894 947 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 956 1193 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 773 787 - -
Lal8g1573 1193 Pfam Sister chromatid cohesion protein PDS5 protein 30 239 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 789 803 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 1015 1049 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 999 1013 - -
Lal8g1573 1193 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 6 635 IPR039776 GO:0007064
Lal8g1573 1193 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 624 1157 IPR039776 GO:0007064
Lal8g1573 1193 CDD TUDOR 903 946 IPR002999 -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 696 714 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 736 759 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 339 359 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 307 327 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 561 596 - -
Lal8g1573 1193 MobiDBLite consensus disorder prediction 360 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1573 Lal-Chr8 20044235 20053079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1573 - - lang:109358393 2002.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1573 8 20044235 20053079 Lal8g1573 8 20044235 20053079 ECH