Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1568 ATGAGATTTGAGATTTGTGGATCGAGAATGGAGAGTTTACCAGTGACAACGAAGAACGATAATCATAGGAAAGGAGTGAGATCAAAGGGAATTCAAACATCTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAAATCTTCTCTAATCATGGCTTTCTTCTCTTGCGTTGCTTGGCTTTACGTTGCTGGCAGGTTATGGCAAGATGCAGAAAATCGTAACTTACTTACTACTCTACTCAACAACAACTCTGCTCAGAGGCCAAAGGTTCTAACAGTCGATGATAAACTCATGCTCCTAGGCTGCAGAGATCTAGAGAGGAAGATTGTGGAAGCAGAGATGGAATTGACACTGGCTAAGAGCCAAGGTTACCTCAAAGGTCACCCACACCAAAATCGCAGGCTTCTTGCTGTTATCGGAGTCTATACTGGATTCGGAAGCCGATTGAAACGAAATGTTTTCAGAGGATCTTGGATGCCTAGAGGTGAAGAAGCCTTGAAAAAACTTGAAGAAAGAGGAGTGGTCATCCGTTTTGTGATTGGTCGGAGTCCGAATCGAGGTGACAGCTTAGATCGCAATATTGATGAGGAAAACCGCTCGACAAAGGATTTCATGATTCTTGAAGGTCACGAGGAAGCTCAAGAAGAGTTGCCTAAAAAAGCAAAAATCTTCTTTAGTACTGCAGTTCGGAACTGGGATGCTGACTTTTATGTGAAAGTTGATGACGGAATTGACATTGATTTGGAGGGTTTAATTGAACTTCTTGAACGCCGCCGAGGTCAGGATGGGGCATATATTGGATGCATGAAGTCAGGACAAGTGATAGCAGAAGAGGGAAAGCAGTGGTATGAACCTGAATGGTGGAAATTTGGGGATGAAAGAACGTATTTCCGACATGCAGCTGGTTCACTTGTTATACTTTCAAAGAATTTAGCACAGTACATTAACATCAACAGTGTATCTTTGAAGACCTATGCCTTTGATGATACATCATTGGGGTCATGGATGATGGGCATCCAAGCAACTTATATAGATGACAGTCATCTTTGCTGTGGTAGTATCAAACAAGGTCAGTTATTTCTTCGCCATACAAGGTATGCTCCACTGCTTGAGTGGACAATGGTGGATTGTGATCACTTCCTTCATTACTTTTGGTGA 1158 0.4214 MRFEICGSRMESLPVTTKNDNHRKGVRSKGIQTSSSSSSSSSSSSKSSLIMAFFSCVAWLYVAGRLWQDAENRNLLTTLLNNNSAQRPKVLTVDDKLMLLGCRDLERKIVEAEMELTLAKSQGYLKGHPHQNRRLLAVIGVYTGFGSRLKRNVFRGSWMPRGEEALKKLEERGVVIRFVIGRSPNRGDSLDRNIDEENRSTKDFMILEGHEEAQEELPKKAKIFFSTAVRNWDADFYVKVDDGIDIDLEGLIELLERRRGQDGAYIGCMKSGQVIAEEGKQWYEPEWWKFGDERTYFRHAAGSLVILSKNLAQYININSVSLKTYAFDDTSLGSWMMGIQATYIDDSHLCCGSIKQGQLFLRHTRYAPLLEWTMVDCDHFLHYFW 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1568 385 MobiDBLite consensus disorder prediction 14 45 - -
Lal8g1568 385 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 36 359 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal8g1568 385 Coils Coil 102 122 - -
Lal8g1568 385 Gene3D - 166 358 - -
Lal8g1568 385 MobiDBLite consensus disorder prediction 28 45 - -
Lal8g1568 385 Pfam Domain of unknown function (DUF4094) 44 122 IPR025298 -
Lal8g1568 385 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT3 36 359 - -
Lal8g1568 385 Pfam Galactosyltransferase 150 344 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1568 Lal-Chr8 20009684 20015893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1568 98 359 Glycosyltransferase AT2G25300 76.226 6.90e-153 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1568 K20854 - gmx:100816327 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1568 8 20009684 20015893 Lal8g1568 8 20009684 20015893 ECH