Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1558 ATGAGACGCACTCCTCCGCCGCCAATCCACTTCCTCACAACCGCCGTCACCGACAACTCCGCCGCGACTGCCACCTCCTCCATCATGTCTTCTTATCCACGTCAACGAGGACGCGGTGGAAGATTCTCCGGCCGTTCATTTTCCAGCGGCAGAGGCCAATTCGTAACCGGCGACTCTCATTTTCGATCGGTCCGCGACGATAATTTAGGTTACCGGCGAGGCGAGAAAGGAAACTTCGTCAACCAAACGCAACCTTATTACCAGAACCAGAATTTTTATCCGACGCCTCAACCACCACTGCCGCCGCCGCCTTATCAACAAAACTCTCAGTTCCGTCATCCTTATCCACCGCATCGTCCGCCTCCGGCGATTGGTCAGCAATTCTATCCTCGACAAAAGGCTCCGGATCATAGAGAGTGGGAGGCTGCAAAGACGCCACAACCTCCTCCTCCTCATTGTGAACGGTTTAAAGTTCTTTCCTATAATATATTGGCTGATTACCTTGCTTGGGACCACCGGAGAGCACTTTACTTTCACATACCCCAACACATGTTGGACTGGCAGTGGAGAAAGAGAAGTATACTTTTTGAGCTTGGATGGTGGTCTGCTGATATCATGTGTTTTCAGGAGGTTGATAGATTTCATGACTTGGCAGAGGAGTTGAAGCTAAAGGGATACAGTGGCATCTGGAAGATGCGTACGGGCAATCCAGTTGATGGCTGTGCAATCTTTTGGCAGATATCAAGGTTCAAGTTGTTATATGAAGAATCTATTGAGTTTAATAAGCTGGGACTTAGGGATAATGTTGCTCAAATATGCGTACTGGAGTTCATTAATCAAAATGGATCTGTCCCATCCAGCTTGACAGGTTATAGTAAAATTGTTGTTTGCAACATTCATGTGCTTTACAATCCAAAAAGAGGAGAAATTAAACTTGGCCAGGTCAGAGTGCTACTCGATAGGGCTAACACTGTTTCTAAACTCTGGAATAATGCTCCTGTTGTTATCTGTGGGGACTTTAACTGTACCCCCAAGAGTCCACTGTACAACTTTATCTCAGAACAGAAGTTAGATTTATCTGGAATAGAAAGGGATAAGCTATCAGGACAGGCTGCTGCTAAAATTCGTTCACCACCAACGCTTGAAAGAGTTTCTGGTGGTTCAGCTCAGACCATATCTATTGAAGGTGACAAGGAAGTTAATGTAGAACAAAATAATTCTTTGTCAGACATGCAGAATCCTAGCACTAAGTGTAACAGTTCAGAGAATCAATATGCTCACACTGTTCTGGATGTGTCTAAATTGTCTGTGACAACTGTGCAGCATGGAAAGGAGAATGTTGCATATGCAGGAAAGGATTATCAGGAGCCTGCTATTGAACATTCTAAGATTTTTGGTGAAGTTGATAACATAAAAGAAGAGCAAAATCCTTCTTATGGTGAAGTTAGGCACCCTGTTGATAGTATAAATGCTGAGATTCATGACATCACAGTTACTACCTCTTCAGATACTGTCGCAGCTTTAAGTCAAGAATCATTAAGCAAAGAGTCCAACCTACTTGTCCCTGAAGGAAACAAACATATGGAGATTAATTTCCCCCCAACCTCTCTCCAAGAAGACAATCAATCTTCCAAGGTCAAGATAGGTCTTGAGTCAGTAGATCTTCTCAATTTAGAAATCTCTATAACTAAACCATCCAGCGAGACTTCAGTCTCCGATGTTAATAACCAAAGGAACAGCCCATCAACCTCGGATCTTATTGGCAAATCACATAAATCCACCAACATTGACTTTCCACTAGATGAAAAGCTCGAGAAATCATTCCTTGATGAGGTAGATAAAGCCTTAATAGGCAGCGAAAATACTAGCGAAGATGACAGCGCTTTCATATCTTCCTTACATAATGCCGAAGAAGGTGCCACTCTTGATCTTGGCCCATCAATTAAATCAGATATTGGAAACTCGTTTCAGTTTGATGAATCAGATTCTGCCTCCAACAAGTTGTTGCTGGCTGAAGAAAGCAATGAAGTGGAGGATGACTTATCTCTTAGTCAGAGTTCCAAATCAATTGATGCAGAGTATACTCCTTATAATCCATCATTATGGACCCCTATGGAGATAGAAACCGCAACGGGAAATGTAGACTGTACCTTCTTGGAGCACCAATTACCACTTTGGAGCACATATACTGAAGCCATGGATTGTTCAGGGACTAGAGACCCCAATGGCGAGCCCCTAGTGACCAGTTATAATAGGTGCTTCTTCGGAACTGTTGACTACATTTGGCGATCTGAAGGTTTGCAAACAACCCGAGTTCTTGCTCCAATACCTAAACATGCCATGGATTGGACTCCAGGATTCCCAACAAAGAAATGGGGTAGTGATCATATTGCTCTAGTTTCCGAGTTGGTGTTATTGAAAGATGGCATAGACATCAACAAGGATGTTAAATAG 2454 0.434 MRRTPPPPIHFLTTAVTDNSAATATSSIMSSYPRQRGRGGRFSGRSFSSGRGQFVTGDSHFRSVRDDNLGYRRGEKGNFVNQTQPYYQNQNFYPTPQPPLPPPPYQQNSQFRHPYPPHRPPPAIGQQFYPRQKAPDHREWEAAKTPQPPPPHCERFKVLSYNILADYLAWDHRRALYFHIPQHMLDWQWRKRSILFELGWWSADIMCFQEVDRFHDLAEELKLKGYSGIWKMRTGNPVDGCAIFWQISRFKLLYEESIEFNKLGLRDNVAQICVLEFINQNGSVPSSLTGYSKIVVCNIHVLYNPKRGEIKLGQVRVLLDRANTVSKLWNNAPVVICGDFNCTPKSPLYNFISEQKLDLSGIERDKLSGQAAAKIRSPPTLERVSGGSAQTISIEGDKEVNVEQNNSLSDMQNPSTKCNSSENQYAHTVLDVSKLSVTTVQHGKENVAYAGKDYQEPAIEHSKIFGEVDNIKEEQNPSYGEVRHPVDSINAEIHDITVTTSSDTVAALSQESLSKESNLLVPEGNKHMEINFPPTSLQEDNQSSKVKIGLESVDLLNLEISITKPSSETSVSDVNNQRNSPSTSDLIGKSHKSTNIDFPLDEKLEKSFLDEVDKALIGSENTSEDDSAFISSLHNAEEGATLDLGPSIKSDIGNSFQFDESDSASNKLLLAEESNEVEDDLSLSQSSKSIDAEYTPYNPSLWTPMEIETATGNVDCTFLEHQLPLWSTYTEAMDCSGTRDPNGEPLVTSYNRCFFGTVDYIWRSEGLQTTRVLAPIPKHAMDWTPGFPTKKWGSDHIALVSELVLLKDGIDINKDVK 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1558 817 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 43 805 - -
Lal8g1558 817 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 43 805 - -
Lal8g1558 817 Pfam Endonuclease/Exonuclease/phosphatase family 159 359 IPR005135 GO:0003824
Lal8g1558 817 MobiDBLite consensus disorder prediction 566 591 - -
Lal8g1558 817 MobiDBLite consensus disorder prediction 92 124 - -
Lal8g1558 817 MobiDBLite consensus disorder prediction 88 149 - -
Lal8g1558 817 MobiDBLite consensus disorder prediction 566 592 - -
Lal8g1558 817 MobiDBLite consensus disorder prediction 30 54 - -
Lal8g1558 817 SUPERFAMILY DNase I-like 140 362 IPR036691 -
Lal8g1558 817 Gene3D Endonuclease/exonuclease/phosphatase 654 814 IPR036691 -
Lal8g1558 817 Gene3D Endonuclease/exonuclease/phosphatase 126 444 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1558 Lal-Chr8 19903822 19913757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1558 219 355 EF-hand Containing Proteins AT1G02270 24.828 3.33e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1558 - - lang:109358231 1491.48