Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1318 ATGAAAGGTGTAGGAGGAGATTTAGCACAGAGAATAAGCCATGCTCTAATCTCAGCTTCAAACCCAACACGTTCATGGACTTCAACACTTGAACACAAACTCCACAACCTCAATTGTCGCCATTTCTTAACCCCTTCACTTGTAGCCACAGTCATAGACCCTTACCTTCTCACCCATCACTCACTCGCCCTTGGTTTCTTTAACTGGGCCTCTCAGCAACCCAATTTCAGTCACACTCCAACCACTTTTCACTCAATTCTCAAATCCCTCTCTCACCCACGTCACCATTCCATCAATGCCATTGATTCCATTCTCAAACAAGCCAAAGCTCTTAACTTTGTTGTCCATCCTTCACTTTTAACCTCCATTATTGGTTCCTACATTGCTGGGAGTAATACCCAGAAAGCTTTTCTTGTTTATAATGGTGTTGGGGATAGTAAGGGTGAGATTGGGAGCCATACTTGTAACTCCCTCTTGGCTGCTCTTGCTTCTGATGGGTATTTAGATAGTGCGTGTAAGGTGTTTGATGAAATGCGTGTCAGGGGTGTGGCTTTCAGTACTCTTGGTTTTGGGGTTTTTATATGGAGGCTTTGTAGGGAGGGTGATTTGGAGAGAGTTTTGGGTGTGTTGGATGCGGTTAGGGAATGTGGTTCTGGGATTGATGGGTCTGTTGTGGCTGTTTTGATTGTCCATGGGTTGTGTTGTGCTTCTAAGGTGTCGGAGGCTTTGTGGATGTTGGGGGAGCTGAGGAATAGGGGCTGGAAACCTGATTTTGTCGCTTATCGGGTTGTTGCAGTGGTGTTTCAGGAGATGCGGAATGTGGCTGATGAGGTTAAGGTTTTGAAGATGAAGAGAAAGTTAGGGGTTGCGCCGAGAAGCGGTGATTACAGGGAGATGATACTTGGGTTGGTTTCGGAGAGGCGGGTTAATGAAGCAAAAGAACTTGGGGAGATAATAGTTAAAGGTAAATTTCCTGTTGAGGATGATGTTCTCAACGCGCTGATAGCATCAGTGTCAAGTATTGATCCTGCTGCCGCAATTATGTTTTTCAATTTCTTGGTTCAAAAAGAGAGATTCCCAAGTTTTTCGACCATTAGCAGTATGTGTAGGAATCTGTGTAGGCATGGCAGGGTTGATGAATTATTGGAGGTGTTCCGTGTTTTAGATTCCCGTGACTACTTCAAAGATGTAGAGGGTTACAATGTGATGGTTTCGTTCTTGTGCAAGGCTGGGAGAGTGAAAGATGGCTATGCTGTTCTCCATGAAATGAGGAAGAAAGGGTTCAGCCCTAATGTCGAGTCTTATAACTATGTGATGGAAGCATGTTGTAAGGAGGATCTATTGCGTCCGGCAAGGAAGCTTTGGGATGAGATGTTTTCATGTGGTTGTTGTGGGAACTTGAAAACATACAACATTCTAATAAGAAAGTTTTCTGAAGTGGGACAAGCCGAAGAAGCTCGGGTGCTGTTTCATCACATGTTGGACAAAGGAGTGGTTCCTGATGTTACAAGCTACACTTATCTTCTCGAAGGACTTTGTCAAGAAGATAAGGTTGAAGCAGCATTTAAGCTTTATAACAGGTCCATCGAACAGGACATAAACCTTGCGAGAGACATATTGAGCTCGTTCGTATTATCACTCTGCAGAAAAGGACATTATTTGGATGCTTCCAAGTTACTTTCTGATCTCAATCTTCATATAGGACATGCAGAATGCCATGTTATTCTGTTGAAATGCTTGGCAGATACAAAAGAGATTTCAATTGCCATTGAGCACTTGAAATTGGTTAAGGAAAAGTCACCTTTGATGTTACAAGATATATATAATGGACTTTTAGCTTCTCTTTCTTCTGCTACATGCCAAGAACCAATGTTAAAGTTTCTTCAAAGAATACAAGATGTGTTTGATTTTCCATATAAGAGTACTACTCTGGAGGGTATGTGCCACTAA 1950 0.4267 MKGVGGDLAQRISHALISASNPTRSWTSTLEHKLHNLNCRHFLTPSLVATVIDPYLLTHHSLALGFFNWASQQPNFSHTPTTFHSILKSLSHPRHHSINAIDSILKQAKALNFVVHPSLLTSIIGSYIAGSNTQKAFLVYNGVGDSKGEIGSHTCNSLLAALASDGYLDSACKVFDEMRVRGVAFSTLGFGVFIWRLCREGDLERVLGVLDAVRECGSGIDGSVVAVLIVHGLCCASKVSEALWMLGELRNRGWKPDFVAYRVVAVVFQEMRNVADEVKVLKMKRKLGVAPRSGDYREMILGLVSERRVNEAKELGEIIVKGKFPVEDDVLNALIASVSSIDPAAAIMFFNFLVQKERFPSFSTISSMCRNLCRHGRVDELLEVFRVLDSRDYFKDVEGYNVMVSFLCKAGRVKDGYAVLHEMRKKGFSPNVESYNYVMEACCKEDLLRPARKLWDEMFSCGCCGNLKTYNILIRKFSEVGQAEEARVLFHHMLDKGVVPDVTSYTYLLEGLCQEDKVEAAFKLYNRSIEQDINLARDILSSFVLSLCRKGHYLDASKLLSDLNLHIGHAECHVILLKCLADTKEISIAIEHLKLVKEKSPLMLQDIYNGLLASLSSATCQEPMLKFLQRIQDVFDFPYKSTTLEGMCH 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1318 649 Pfam PPR repeat 154 183 IPR002885 -
Lal8g1318 649 Pfam PPR repeat 229 253 IPR002885 -
Lal8g1318 649 Gene3D Tetratricopeptide repeat domain 448 574 IPR011990 GO:0005515
Lal8g1318 649 Gene3D Tetratricopeptide repeat domain 58 226 IPR011990 GO:0005515
Lal8g1318 649 Gene3D Tetratricopeptide repeat domain 325 447 IPR011990 GO:0005515
Lal8g1318 649 Gene3D Tetratricopeptide repeat domain 227 322 IPR011990 GO:0005515
Lal8g1318 649 TIGRFAM PPR: pentatricopeptide repeat domain 504 533 IPR002885 -
Lal8g1318 649 TIGRFAM PPR: pentatricopeptide repeat domain 153 184 IPR002885 -
Lal8g1318 649 TIGRFAM PPR: pentatricopeptide repeat domain 434 466 IPR002885 -
Lal8g1318 649 TIGRFAM PPR: pentatricopeptide repeat domain 469 502 IPR002885 -
Lal8g1318 649 TIGRFAM PPR: pentatricopeptide repeat domain 400 432 IPR002885 -
Lal8g1318 649 Pfam PPR repeat family 467 514 IPR002885 -
Lal8g1318 649 Pfam PPR repeat family 395 444 IPR002885 -
Lal8g1318 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 431 465 IPR002885 -
Lal8g1318 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 151 185 IPR002885 -
Lal8g1318 649 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 7 635 - -
Lal8g1318 649 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 7 635 - -
Lal8g1318 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 466 500 IPR002885 -
Lal8g1318 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 396 430 IPR002885 -
Lal8g1318 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 501 535 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1318 60 563 Glycosyltransferase AT1G05670 23.723 1.08e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1318 - - gmx:100813184 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1318 8 16298428 16301355 Lal8g1318 8 16298428 16301355 ECH