Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1114 ATGTTCAGAACATTAGCCAGGGAGTTGAAGTTCAAGGTCTTTGACAACAATTTGCTTAAAAAAAACAGCAGATTCTATGCAACGGTTGGTGGTAGAAGGCTAGAAGGAAAAGTGGCACTCATAACAGGGTCAGCAAATGGACTTGGCAAAGCCACTGCCCATGAATTTATCCAAAATGGAGCCCAAGTCATCATTGCTGATAATGATACTAAACTTGGGCCACAAGTTGCAAAAGCATTGGGCCCTTCAGCCCAATATGTAGAATGTGATGTCACTATTGAGTCCCAGATAGAAGAAGCTGTAAATGTTGCTATAACCAAGTATGGCAAACTAGACATCATGTACAACAATGCTGGCATAACTGGCCCAACAATTCCACCAAGTATCACAGACCTAGACCTTGATGAATTTGATAAGGTCATGAGGATCAATGTATGGGGAATGCTTGCAGGTATAAAGCATGCGGCCCGAGTCATGGTACCCGCGGGCTATGGTTCCATTCTATGCACATCTAGCATAAGTGGGCTATTGGGTGGGCTTGGGCCTCATCCATACACAATATCAAAGTTTACAATACCTGGGGTGGTGAAGTCTGTGGCTAGTGAGTTATGTAGAGCTGGAATCAGAGTCAACTGCATATCCCCATCTCCAATTCCAACATCCATGTCCATAGATCAAATAGGGAAGTTTTATCCTGGCTTAACCCAACAACAAGTAATTGACATTGTGAATGGGCTTGGTGAGCTCAATGGTGCTAAGTGTGAAGACATTGATGTGGCCCGAGCTGCTTTGTTTTTAGCATCAGATGAAGCAAAGTATATCTCAGGTCACAACCTAATTGTGGATGGAGGGTTCACTTGCTTTAAAAATCTTACCTTCCCTTCTTCGGATCAAATTGCTTAA 903 0.4308 MFRTLARELKFKVFDNNLLKKNSRFYATVGGRRLEGKVALITGSANGLGKATAHEFIQNGAQVIIADNDTKLGPQVAKALGPSAQYVECDVTIESQIEEAVNVAITKYGKLDIMYNNAGITGPTIPPSITDLDLDEFDKVMRINVWGMLAGIKHAARVMVPAGYGSILCTSSISGLLGGLGPHPYTISKFTIPGVVKSVASELCRAGIRVNCISPSPIPTSMSIDQIGKFYPGLTQQQVIDIVNGLGELNGAKCEDIDVARAALFLASDEAKYISGHNLIVDGGFTCFKNLTFPSSDQIA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1114 300 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 17 296 - -
Lal8g1114 300 Pfam Enoyl-(Acyl carrier protein) reductase 43 286 - -
Lal8g1114 300 PRINTS Glucose/ribitol dehydrogenase family signature 38 55 IPR002347 -
Lal8g1114 300 PRINTS Glucose/ribitol dehydrogenase family signature 109 120 IPR002347 -
Lal8g1114 300 PRINTS Glucose/ribitol dehydrogenase family signature 159 175 IPR002347 -
Lal8g1114 300 PRINTS Glucose/ribitol dehydrogenase family signature 185 204 IPR002347 -
Lal8g1114 300 PRINTS Glucose/ribitol dehydrogenase family signature 206 223 IPR002347 -
Lal8g1114 300 PRINTS Glucose/ribitol dehydrogenase family signature 249 269 IPR002347 -
Lal8g1114 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 109 120 IPR002347 -
Lal8g1114 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 173 IPR002347 -
Lal8g1114 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 204 IPR002347 -
Lal8g1114 300 PANTHER ALCOHOL DEHYDROGENASE-LIKE PROTEIN 17 296 - -
Lal8g1114 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 287 IPR036291 -
Lal8g1114 300 Gene3D - 27 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1114 Lal-Chr8 9325050 9329406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1114 34 286 Acyl Lipid Metabolism Gene Families AT1G63380 31.061 2.05e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1114 - - gmx:100808525 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1114 8 9325050 9329406 Lal8g1114 8 9325050 9329406 ECH