Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1040 ATGGGTGCGAGTCGAAAGCTTCAGGGAGAGATCGATCGCGTTCTCAAGAAGGTCCAAGAAGGCGTTGAAGTTTTCGATAGTATCTGGAACAAGGTTTACGATACTGACAATGCTAATCAGAAGGAGAAGTTTGAGGCAGATCTCAAAAAGGAGATTAAGAAGCTTCAGAGGTACAGAGACCAGATTAAGACTTGGATTCAGTCTAGTGAAATCAAGGACAAGAAGGTCAGTGCCTCTTACGAGCAGGATTTGGTGGATGCACGCAAGCTAATTGAGCGTGAAATGGAAAGATTTAAGATCTGTGAGAAGGAGACTAAGACCAAAGCATTCTCTAAAGAAGGCTTGGGTCAACAACCCAAGACGGACCCGAAAGAGAAAGCAAAATCAGAAACAAGAGATTGGTTGAATAATGTGGTTGGAGAGTTAGAATCTCAGATTGATAGCTTTGAAGCCGAGCTTGAGGGGCTTTACGTCAAAAAAGGAAAGAATCGACCACCCAGATTGACACATCTTGAGACATCAATTACTCGGCACAAGGCTCATATAAAGAAATGTGAATTTATCTTGAGGCTACTAGATAATGATGAATTAAGTCCTGAGGAGGTTAATGACGTCAAGGATTTCTTGGATGATTATGTAGAGCGTAATCAGGATGACTTTGATGATTTCACTGATGTTGATGAACTATACAGTTCATTACCTCTAGACAGGGTGGAGACTCTTGAAGATCTTGTCACAATTCCCCCTGGTATTGTTAAGGTAACACCTGGTCTTATGTCTAAGAATACTGTGGCAACATCAGCATCTGCATCAGCATCTGCATCACAAACATCTGAGCAAGCTGATGACACAGCATCACAGGATAGCAACTCAGACATTGTTCCAAGAACTCCACCTTCTAAGAATAGTGGAATTAGTTCTCCTGCTTCAACACCAACTGGGAACCATGCTACTCCTGTTTCTGTGAATGTTTATGCTCATAACTTGTCCGCTGCACCAGCTGTTGTATCAGTCTTACCTGGTTCGAACTCTGTTCGGAACCCCTTGGAGAATACTAATGCTGCCAATTCTTCATCTTCCATTAATCAGTCTACCTCTGTCAAAGAAGAGATTAATAGCTCCCCTGTCCGAAGACCATCTCCATCACTTTCTGATGCAGCACTTGGGAAGGACACTGTCAGAAACAACCTATCAAATCAAGTAACAGCTAGCATCCCCCTTGGTTCTGGTAACATGGTTTCCAGCAATGTGCCCCTTGGTTCAGTCCCTTCAGCCTCTGAAATAAGCAAGAGAAGCATGCTGGGAGCTAATGATAGAATTGGAAGTAGTGGGATAGTGCAGCCTCTTGGATCCCCCCTAACTAATAATAGATATATCCTACCTCAGGTTGTGAGAGCTAATGATGGCACTGCCTCAGCTGACTCTATTACTGTTAATGAAGCTCCAGCTGTGTCTGCAACAGGGAGAATTTTCTCCTCTTCTGTGGTTCCTGGTATTCAGTGGAGACCTGGAAGCCCTTTCCCAAATCAGAATGAAGCGGGGCAGCTTCGTGGCAGAACTGAAATAGCTCCAGATCAAAGGGAAAAGTTTTTGCAGAAATTTCAGCAGGTGCAGCAGCAAGGGCACAGTACGCTTCTTACTATGCCCTCTCTCATTGGTGGAAATCAAAAGCAGTTTCCTGCCCAGCAGCAGAATCCCCTTCTACAGCAGTTTAACTCTCAAGGCTCGTCTGTTTCTTCTGAATCTGGTATGGGACTCGTAGTCCAATCACCAGGTCTCAGTGGTATATCTTCTGCTTCATTACAACAGCCACCCAATTCTGTTCATTCCCCTTCTAGTCAACAACCATTGATATCAGGTGTTTCTAAAGATGCAGATGTTGGCAATTCTAAGGTTGAAGAACAGCAGCAACATCAGAGTTTTCCCGATGAGTCAGCTACTGAATCTACTGTTAGTACTGAGATTGGCAAAAACCTCATGAATGAAGATAATTTGAAATCAGCATATGCTGTAGATTCTCCTGCAGGAGTATCTGCCTCTCTTACAGAGCCCCATCAAACTTCCAGAGATATTGATTTGTGTCCTGGTCAACCTTTACAATCCAATCAACCTACTGGTAATCTTGGGGTCATTGGAAGAAGAAATGGTGCTGATCTAGGAGCCATTGGCGATAACTTTAGTGGATCAAGTGTTAATTCTGGTGGAGTGCGTGAACAATTATATAATTTGGAAATGCTTGAGGCGGCTTACCACAGACTTCCGCTGCCGAAAGACTCAGAACGTCCTAGGACATATACTCCTAGGCACCCAACGATAACACCACCCAGTTATCCTCAAGTACAGGCACCTGTTGTTAATAATCCTGCCTTTTGGGAGAGAGTAGGTCTTGAACCATTTGGCACCGACACCCTGTTCTTTGCGTTTTATTATCAACAGAACACATACCAACAGTATTTGGCTGCAAAGGAGCTAAAGAAGCAGTCATGGAGATACCACAGAAAGTATAACACATGGTTTCAGCGGCATGAAGAGCCCAAAGTTGCCACAGATGAATATGAGCAGGGAACATATGTGTACTTTGATTTCCATATTGCAAATGACGACCTGCAACATGGGTGGTGTCAAAGAATCAAGACTGAGTTCACTTTTGAGTATAATTATCTTGAAGATGAGCTTTTTGCTTAG 2685 0.4346 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQDLVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDSFEAELEGLYVKKGKNRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEEVNDVKDFLDDYVERNQDDFDDFTDVDELYSSLPLDRVETLEDLVTIPPGIVKVTPGLMSKNTVATSASASASASQTSEQADDTASQDSNSDIVPRTPPSKNSGISSPASTPTGNHATPVSVNVYAHNLSAAPAVVSVLPGSNSVRNPLENTNAANSSSSINQSTSVKEEINSSPVRRPSPSLSDAALGKDTVRNNLSNQVTASIPLGSGNMVSSNVPLGSVPSASEISKRSMLGANDRIGSSGIVQPLGSPLTNNRYILPQVVRANDGTASADSITVNEAPAVSATGRIFSSSVVPGIQWRPGSPFPNQNEAGQLRGRTEIAPDQREKFLQKFQQVQQQGHSTLLTMPSLIGGNQKQFPAQQQNPLLQQFNSQGSSVSSESGMGLVVQSPGLSGISSASLQQPPNSVHSPSSQQPLISGVSKDADVGNSKVEEQQQHQSFPDESATESTVSTEIGKNLMNEDNLKSAYAVDSPAGVSASLTEPHQTSRDIDLCPGQPLQSNQPTGNLGVIGRRNGADLGAIGDNFSGSSVNSGGVREQLYNLEMLEAAYHRLPLPKDSERPRTYTPRHPTITPPSYPQVQAPVVNNPAFWERVGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELFA 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1040 894 MobiDBLite consensus disorder prediction 110 132 - -
Lal8g1040 894 MobiDBLite consensus disorder prediction 268 318 - -
Lal8g1040 894 Coils Coil 41 61 - -
Lal8g1040 894 Gene3D - 734 889 IPR038635 -
Lal8g1040 894 MobiDBLite consensus disorder prediction 347 388 - -
Lal8g1040 894 PANTHER CCR4 NOT-RELATED 1 892 IPR040168 GO:0030015
Lal8g1040 894 Coils Coil 139 159 - -
Lal8g1040 894 MobiDBLite consensus disorder prediction 347 380 - -
Lal8g1040 894 PIRSF NOT_su_3_5 1 894 IPR012270 GO:0006355|GO:0030015
Lal8g1040 894 Pfam NOT2 / NOT3 / NOT5 family 750 888 IPR007282 GO:0006355
Lal8g1040 894 MobiDBLite consensus disorder prediction 632 652 - -
Lal8g1040 894 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Lal8g1040 894 MobiDBLite consensus disorder prediction 571 620 - -
Lal8g1040 894 MobiDBLite consensus disorder prediction 571 652 - -
Lal8g1040 894 PANTHER BNAA10G16600D PROTEIN 1 892 - -
Lal8g1040 894 MobiDBLite consensus disorder prediction 118 132 - -
Lal8g1040 894 MobiDBLite consensus disorder prediction 756 779 - -
Lal8g1040 894 MobiDBLite consensus disorder prediction 676 708 - -
Lal8g1040 894 MobiDBLite consensus disorder prediction 679 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1040 Lal-Chr8 8306084 8322613 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1040 K12580 - gmx:100783415 1416.36