Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1002 ATGAACTTCGATCCTGCATCCTCCAAATCAACACAAGCTCTCAACACTATAAAGGAAATTTCATCTTCTTCGCGAACCATTCCTTCCGACAAGGACTTCAAATTATGCTACACCTCCGACGAATTCAAACGCTCTATCGATGAAATCGCCAGAAAATCGAACTCAATGTTGCAACAAATCGGCGCCGCGAAGCATATTTGGGGCACGGAGGAAGCTGGTTTTCCCGTCGGAATTGACGACGCGTATGAATGGCTTGTGGATGTGAATCAAGAGGTTTTTGGACGGGTTGATGAGTCGATTAAGGAGTTGCAGAAGATTATGAAGTTTGAGGATGATGAAATGGAATTGGAGAATGGGAAGAAGAAAAAGATGAAGAAAGTGAAAGTGGAAACTAAGGATAAGGAGAAAGTTTCGTTTCATATATCGGCGATTGAGAAGCCTCAGAATAAGTATAACTTTTTGGTTAATAATGCAAACCAACCTTTTCAGCATGTTTGGTTGGAAAGGAGTAATGATGATCAGAGGTTTATTCATCCATTGGAGAAACTCTCTGTTTTAGATTTTGTTCATAAAGATGTTGAGGATCTTGTGCCAATGGAACCTCCCTCATTAGAGAGCACCCCTTTCAAGCTTGTGGAAGAAGTCAAAGGATTGAAGGAGTTGGCTGCTAAGCTTCAATCCGTTAATGAATTTGCGGTGGATTTGGAACATAATCATTATCGTTCCTTCCAAGGTTTGACTTGCTTGATGCAAATCTCAACCAGGACTGAAGATTTTATTGTGGATACCCTGAAGCTTCGCGTTCATGTTGGACCTTACCTGAGGGAACTCTTCAAGGATCCTACCAAGAAGAAAGTCATGCATGGAGCAGATTCAGACATTGTGTGGTTGCAACGAGATTTTGGCATTTACGTTTGTAATTTGTTTGACACTGGCCAGGCTTCAAGGGTGTTAAAATTGGAGAGATTTAGCTTGCAATATCTTTTGCTGCACTATTGTGGGGTTACTGCAAACAAAGAATACCAGAAAGCAGATTGGAGACTACGGCCTCTACCTGATGTCATGCTGAGATATGGAAGAGAAGATACACACTATCTGTTGTACATATATGATGTAATGAGGATCAAGTTACTTGCACTGTCTAAGGAGTCTGAAAGTTCTGATAATCCTCTGGTGGAGGTTTACAAGCGCAGTTATGATGTCTGCATGAAGCTGTACGAGAAAGAACTTCTAACAGAAGACTCATACCTTCATATATATGGGTTACAAGGGGCTAGTTTTAATGCACAGCAGCTTGCCATTGTTTCCGGGCTTTATGAATGGCGGGACATTGTTGCTCGTGCAGAGGATGAGGGTACTGGCTATGTATTGCCAAATAAAACTATTCTTGAAATCGCTAAGCAGATGCCTGTCACTACAAGCCATCTACGTCGATTGGTAAATTTACATGTCCCATATATTGAGCGCAACCTTGACGTTATTCTCAGCATCGTTAGACATTCTGTACAAAATGCTCCTGCCTTTGAAGAAGCTGCACTCCGTTTGAAAGAAGCCCACGCAGCAAGTGTGTTAAATGCAAAAGAAAAAACTGCAATTGAAAATGTCATCTCTGTTAATATCTCAGAGAAGGCTCCATTTTCTTCAGACCTGAAGGAGGAATCTTTTCAGCACCAGGATAAAAATGGACAAATAACAACTAATTCCAATTGTCCCACTTCAGAGCTCCCTAAGGATAAAGGAGCAAACGTTCAGTTGCTTAAAACGCCTAATGGTGATGGCGGGGTACTTCCGGGAAATTCAGCTTCCAAAACTGAGCTTGATTATGTTAAAAAGGGCAAGGAAGAGGTCAAGTTGGAGCCAATCGGATCGTCTATCAACCTTCCTTTACATTCAGGCATGGTTTCGACTTCCACTCCAGCCGACGTTATAATGATAGACTCCGACACAGATTCGGAGGATATGGCAGATAACAATGGAGAAAGGTACAACGAGCAACGGGGGAACGTGGATGATGATGACTCATCGTCTTTCTCAGATTTGTCATTGTAG 2049 0.4197 MNFDPASSKSTQALNTIKEISSSSRTIPSDKDFKLCYTSDEFKRSIDEIARKSNSMLQQIGAAKHIWGTEEAGFPVGIDDAYEWLVDVNQEVFGRVDESIKELQKIMKFEDDEMELENGKKKKMKKVKVETKDKEKVSFHISAIEKPQNKYNFLVNNANQPFQHVWLERSNDDQRFIHPLEKLSVLDFVHKDVEDLVPMEPPSLESTPFKLVEEVKGLKELAAKLQSVNEFAVDLEHNHYRSFQGLTCLMQISTRTEDFIVDTLKLRVHVGPYLRELFKDPTKKKVMHGADSDIVWLQRDFGIYVCNLFDTGQASRVLKLERFSLQYLLLHYCGVTANKEYQKADWRLRPLPDVMLRYGREDTHYLLYIYDVMRIKLLALSKESESSDNPLVEVYKRSYDVCMKLYEKELLTEDSYLHIYGLQGASFNAQQLAIVSGLYEWRDIVARAEDEGTGYVLPNKTILEIAKQMPVTTSHLRRLVNLHVPYIERNLDVILSIVRHSVQNAPAFEEAALRLKEAHAASVLNAKEKTAIENVISVNISEKAPFSSDLKEESFQHQDKNGQITTNSNCPTSELPKDKGANVQLLKTPNGDGGVLPGNSASKTELDYVKKGKEEVKLEPIGSSINLPLHSGMVSTSTPADVIMIDSDTDSEDMADNNGERYNEQRGNVDDDDSSSFSDLSL 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1002 682 MobiDBLite consensus disorder prediction 559 575 - -
Lal8g1002 682 Pfam HRDC domain 431 498 IPR002121 GO:0003676
Lal8g1002 682 MobiDBLite consensus disorder prediction 645 682 - -
Lal8g1002 682 SUPERFAMILY Ribonuclease H-like 144 407 IPR012337 -
Lal8g1002 682 PANTHER 3'-5' EXONUCLEASE 17 632 - -
Lal8g1002 682 Pfam 3'-5' exonuclease 212 376 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lal8g1002 682 SMART hrdc7 428 507 IPR002121 GO:0003676
Lal8g1002 682 MobiDBLite consensus disorder prediction 654 673 - -
Lal8g1002 682 ProSiteProfiles HRDC domain profile. 428 508 IPR002121 GO:0003676
Lal8g1002 682 Gene3D HRDC domain 417 509 IPR044876 -
Lal8g1002 682 Gene3D - 134 416 IPR036397 GO:0003676
Lal8g1002 682 MobiDBLite consensus disorder prediction 555 577 - -
Lal8g1002 682 CDD Rrp6p_like_exo 205 397 - -
Lal8g1002 682 SUPERFAMILY HRDC-like 410 504 IPR010997 GO:0000166|GO:0044237
Lal8g1002 682 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 17 632 IPR045092 GO:0000175|GO:0000467
Lal8g1002 682 SMART 35exoneu6 209 378 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1002 Lal-Chr8 7798100 7807984 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1002 K12591 - gmx:100815329 749.199