Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0971 ATGAGAACAATGCTATCTTCTCATGTTCTTGTTCTCCCTCAACCCTTCACTACTCCACTAAAACGACACCGTATTACAACTACTACCCTCAAACCTTTTACTTATTCTCCTCCGTATAAACTATCTTCCTCCGTCTCCGTTAGACCTTCACCGTTAGTGTCAGCGCACTCTAGCAATAGAGAAGGACTTGACACCGTTAACATTGCCGAAGATGTTACCCAGTTGATTGGAAATACACCAATGGTGTACCTCAATAAAGTTACAGAAGGCTGTGTGGCAAATATTGCTGCAAAACTCGAGTCTATGGAGCCTTGTCGAAGTGTCAAGGACAGAATTGGCTATAGCATGTTATCTGATGCCGAAGAGATGGAAGCAATTTCTCCAGGGAAGACTACTTTAGTTGAACCAACAACAGGAAATACAGGACTTGGCCTTGCTTTTGTTGCAGCAACAAGAGGATACAAACTTATAGTCACGATGCCCGCTTCTGTAAATATTGAGAGGAGAGTTCTTTTACGGGCATTTGGTGCAGAGGTTGTTCTGACTGATGCAGAGAAGGGACTGAAAGGGGCAGTTGACAAAGCTGAAGAAATTGTTCATAGAACTCCTAATGCTTACATGTTTCGACAATTTGATAACATGACTAACACAAAGATCCACTTCGAAACTACAGGGCCCGAGATATGGGAGGATACCTTGGGTAATGTTGATGTACTGGTTGCTGGGATTGGAACTGGCGGAACTATTACAGGCAGTGGACGTTATCTGAAAATGATGAACCAAAGAATAAAGGTAGTTGGTGTCGAGCCTGCAGAAAGAAGCGTGATCTCAGGAGACAATCCGGATATTGACTATGTTGGAGTCTTTGTTGCAGGTTTTCTGCCTAATAATTTGGATATCAAACTGCTTGATGAAGTTATCAAGGTTACCAATGTTGAGGCTATTGAAATGGCAAGGAGATTAGCATTGGAAGAAGGTTTGCTGGTTGGAATTTCTTCAGGAGCTGCAGCAACAGCTGCCATAAGTTTAGCACGACGCCCTGAGAATTCCGGAAAACTCATTGTGGTTGTATTTCCTAGTTTTGGTGAGAGGTATATTTCCACTGCACTCTTCCATTCAATCTATGAAGAGGTTCAGAAAATGTAA 1146 0.425 MRTMLSSHVLVLPQPFTTPLKRHRITTTTLKPFTYSPPYKLSSSVSVRPSPLVSAHSSNREGLDTVNIAEDVTQLIGNTPMVYLNKVTEGCVANIAAKLESMEPCRSVKDRIGYSMLSDAEEMEAISPGKTTLVEPTTGNTGLGLAFVAATRGYKLIVTMPASVNIERRVLLRAFGAEVVLTDAEKGLKGAVDKAEEIVHRTPNAYMFRQFDNMTNTKIHFETTGPEIWEDTLGNVDVLVAGIGTGGTITGSGRYLKMMNQRIKVVGVEPAERSVISGDNPDIDYVGVFVAGFLPNNLDIKLLDEVIKVTNVEAIEMARRLALEEGLLVGISSGAAATAAISLARRPENSGKLIVVVFPSFGERYISTALFHSIYEEVQKM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0971 381 TIGRFAM cysKM: cysteine synthase 73 371 IPR005856 GO:0004124|GO:0006535
Lal8g0971 381 Pfam Pyridoxal-phosphate dependent enzyme 72 358 IPR001926 -
Lal8g0971 381 Gene3D - 74 367 IPR036052 -
Lal8g0971 381 PANTHER CYSTATHIONINE BETA-SYNTHASE 52 381 - -
Lal8g0971 381 PANTHER S-SULFO-L-CYSTEINE SYNTHASE (O-ACETYL-L-SERINE-DEPENDENT), CHLOROPLASTIC 52 381 - -
Lal8g0971 381 TIGRFAM cysK: cysteine synthase A 73 371 IPR005859 GO:0004124|GO:0006535
Lal8g0971 381 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 98 116 IPR001216 GO:0006535
Lal8g0971 381 Gene3D - 110 212 IPR036052 -
Lal8g0971 381 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 68 375 IPR036052 -
Lal8g0971 381 CDD CBS_like 77 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0971 Lal-Chr8 7420522 7425936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0971 64 381 Miscellaneous Gene Families AT3G03630 77.358 2.71e-165 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0971 K22846 - gmx:100816974 545.428