Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0969 ATGGAGTCAAGCATTCTTGAATCAATAGGTGTAGAAATCATCGGTGTTATGTCACCAGTTTCAATCTGCATGTTCCTCGTGGTTCTCCTTGTCTATTCCCTTTCCTCCGATAACCCCTTTTCTTCTCCTGACTCAACGATTCGCACCGCTGCTAACCTTGTTTACGTTGAAAACCCCTCCGATTCTGTCTCCCAGAAACTCGAAGGCGCGCTCCTAAACGCTGTCGTTTTCGTTATCCTCATTGCCATTGTTACCTTCTTACTTGTCCTTCTTTATTACTACAATTGTACCAATTTTCTTAAATACTACATGCGTTTCTCTGCTTTCTTTGTTTTCGCTTCGATGGGTGGGTCGATCTTCCTTTCTCTGATTCAGAAATTCTCGATTCCTGTTGATTCGGTCACGTGTTTGTTGCTGCTGTTTAATTTCACTATTGTTGGTGTGCTATCGGTTTTCGCCGGCGGGATCCCGATTTTGATGCGGCAGGGTTATATGGTTTGTTTGGGGATTATTGTTGCTGCGTGGTTTACTAAGCTTCCCGAATGGACCACGTGGGTGCTGTTGGTTGCGCTGGCGCTGTATGATCTGGTGGCTGTTTTGGCGCCTGGTGGGCCGTTGAAGTTGTTGGTGGAATTGGCGTCCAGCCGTGATGAGGAGCTTCCGGCGTTGGTGTATGAGGCTCGACCTGCGGTTGCGCCGCGAACTGGTGGTGGTGGTGGTTCTGCTTTAGGGCTTTTGGTCACTGGGGCTATGGAATCGGAACAAGTGTCTTCATCGTCGATTGAGCTTCAGGCAGTGCCCAGGCGCAATGTGAATAGGAATGATAATGAGATTGAGATTCTTGGTGGTAATGTTGATAACTATGTTGTGACAATGGGGGATTTTCGGGATGAGGATAGCCAGAGTGTTAGGGATGGTGAAGAGGAAAGATCACCGTTGGTTGGTAATTCGCGAGGAGGGCAGTTTTCGAGTGCTGATAATGGCCGGAGATTTGATGGTAGAGAGGGTGAGATTGTTGAGGAAATGTCTCCCCTAGTGGAGATGGGGAATAATGAAGGACAGGTGATGAGCAGGGATGGTGTGGAAATTGTTGATAGGGGTATTAAGCTTGGTCTTGGAGACTTTGTTTTCTACAGTGTTCTTGTGGGTAGAGCTGCTATGTATGATCTCATGACAGTGTATGCTTGTTACCTTGCAATTATATCAGGACTAGGGTGCACTCTTATTTTGTTGTCAGTGTGCCGCCAAGCTCTGCCTGCGCTCCCGATTTCGATCATGTTGGGTGTTCTTTTCTACTTTTTGACTCGATTGCTGATGGAACCCTTCATTGTTGGGACAGCCACAAATTTGATGATGTTTTGA 1362 0.4692 MESSILESIGVEIIGVMSPVSICMFLVVLLVYSLSSDNPFSSPDSTIRTAANLVYVENPSDSVSQKLEGALLNAVVFVILIAIVTFLLVLLYYYNCTNFLKYYMRFSAFFVFASMGGSIFLSLIQKFSIPVDSVTCLLLLFNFTIVGVLSVFAGGIPILMRQGYMVCLGIIVAAWFTKLPEWTTWVLLVALALYDLVAVLAPGGPLKLLVELASSRDEELPALVYEARPAVAPRTGGGGGSALGLLVTGAMESEQVSSSSIELQAVPRRNVNRNDNEIEILGGNVDNYVVTMGDFRDEDSQSVRDGEEERSPLVGNSRGGQFSSADNGRRFDGREGEIVEEMSPLVEMGNNEGQVMSRDGVEIVDRGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPISIMLGVLFYFLTRLLMEPFIVGTATNLMMF 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0969 453 PANTHER PRESENILIN 1 453 - -
Lal8g0969 453 Pfam Presenilin 10 443 IPR001108 GO:0004190|GO:0016021|GO:0016485
Lal8g0969 453 SMART psh_8 68 439 IPR006639 GO:0004190|GO:0016021
Lal8g0969 453 MobiDBLite consensus disorder prediction 297 312 - -
Lal8g0969 453 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016021|GO:0016485
Lal8g0969 453 PRINTS Presenilin family signature 178 185 IPR001108 GO:0004190|GO:0016021|GO:0016485
Lal8g0969 453 PRINTS Presenilin family signature 195 212 IPR001108 GO:0004190|GO:0016021|GO:0016485
Lal8g0969 453 PANTHER PRESENILIN 1 453 IPR001108 GO:0004190|GO:0016021|GO:0016485
Lal8g0969 453 MobiDBLite consensus disorder prediction 297 331 - -
Lal8g0969 453 Gene3D Presenilin 348 444 IPR042524 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0969 Lal-Chr8 7381361 7382722 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0969 1 453 Miscellaneous Gene Families AT1G08700 65.376 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0969 K04505 - jre:109007426 586.26