Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0931 ATGGCCAGAGGCGTAATCTCAGACGACGAAGATGAGGTTGAACTCGACGAGGAAGAGAGAGAACCCGTTGATGGGGATGGATTGGATGAGGGTCGCGATGTGGATGATGATGAAGAGGATGAAGAAGAAGAAGGGCAGGATGAATATGAAAATGATGGATTTATAGTTGATGAGGATGAAGAGGAGCAGGATGAAGAAGAGAGAGCAGAAAGTGACGAGGAACGCCAGAAGAGGAGAAAGAAGAAGAGAAAGGAGGAATATATCCTTGATGAAGATGATTATGAGTTGCTGGAAGACAATAACATCAATATTCATCGTCGGAAGGACATTAAAAAGTTCAAGCGGCTGAAAAAAGGCCAGAGGGATACTGAGGAGGAGCCGTCTGGGTTATCTGATGAGGAGGTTTTTGTTGGAGGTGGTAAAGTTGGGCGAACTGCTGAGGAGAAGCTTAAACACCGTTTATTTGGCGATGATGAAGGAGCTCCACTTGAGGATATTGCTGAAGATGAGGAACAAGGAGAAGAGGAGGAGGATGCAGACATTGGAGAAGATGATGAAATGGCTGACTTCATCGTGGATGAAGAAGAAGTTGATGAGAATGGAGCTCCTATGAGACGAACAAAGCCGAAGAAAAAAACTAGGCAGGCTCCTGGAGTCTCTTCCTCAGCTGTTCAAGAAGCTCAAGATATATTCGGTGATGTTGACAACTTACTGCTGACTCGCAAGAAAAATAAAGATTTAAATGAATATACAGAGACTAGACTTGAAGATGAATTTGAGCCTATTATTCTTTCTGATAAGTACATGAGAAAGGAGGATGACCAAATTAGGGAAGTTGATCTTCCAGAGAGAATGCAGATATCGGAGATGAGTACTGGTACTCCTCCACTGGATGGAAGTATAGATGAAGAGAGTCAGTGGATAGTTAAGCAACTTAGTGAAGGAGCAGTCCCTTGGATTTGCAAAAAAAATCCAACCTCCCAAAATAATAGAAAGAACCTACCAATTGACGAGAATGATATTATCAGATTTTTGGAACTGTATCATGTGCAAAAATTAGATATTCCTTTTATTGCTATGTATCGGAAGGAGGAGTGCTTAAGCCTGTTGAAAGACATAGAGCGACCCGAAGCTGGTGGTGAGAGTTCGGATAAGAATAACATGACACCTACTCTAAAGTGGCACAAGGTGCTTTGGGCTCTTCTGGACTTGGACAGGAAATGGTTGCTTCTTCAGAAGCGGAAGGGTGCTTTAGAATCGTACTATACTAAACGGTTTGAAGAGGAGTCCCGGCGTATTTATGATGAAACAAGACTAAACTTGAACCGGCAATTATTTGAATCAGTTATGAGATCATTGAAGGAGGCAGAATCTGAGAGGGAGGTTGATGATGTTGACTCCAAGTTCAACTTGCATTTCCCACCAGGTGAAGCCGGCGTTGATGAAGGACAGTACAAGAGGCCAAAAAGGAAGTCAGTATATAGCACTTACAGTAAGGCAGGACTGTGGGAGGTTGCGAACAGGTTTGGATGTAGTTCTGAGCAGCTTGGAATATGTCTATCTGAAGTTAAGGTGCCTGAGTTGGTAGACCCAAAGGAAACACCAGAGGAGATGGCTTCAAACTTCACATGTGCCATGTATAATACCCCTGAAGAAGTACTCAAGTGTGCTAGGCACATGGCAGCTATTGAGGTAAGTTGTGAGCCTAGCATTAGGAAGCACGTTCGTAGCCACTTTCTTGATCATGCTGTGGTGTCAACATGTCCTACTGCTGATGGGAATGCAGCAATAGATTCTTTTCATGACTTTGCTGTGGTAAAGTGGCTCCGAGAGAAACCTTTGTCTAAATTTGATGATGCACAGTGGCTTCTTATACAGAAGGCAGAAGAGGAGAAACTTCTTCAAGTCACTATTAAGCTTCCTGAAGAGAATCTTAACAAATTAATTGACCAATTCAATGAGTATTATGTTAGTGATAGTGTTAGCAGATCTGCTCAGCTGTGGAATGAACAGAGGAAGTCGATACTGCATGATGCAATTTTTCGCCTTCTTTTACCATCAATGGAAAAAGAGGCAAGAGGTGTATTGGCAAGCAAAGCAAAGAATTGGCTACTTATGGAGTACGGGAAGGCCTTGTGGAATAAGGTTTCTGTGGGACCTTATCAACAGAAGGAGAATGATCTTAGCTCTGATGATGAAGCTGCTCCCAGGGTTATGGCCTGCTGTTGGGGCCCTGGAAAGCCACAAACAACATTTGTCATGTTGGATTCATCGGGGGAAGTGCTAGATGTGCTTTACACTGGATCCCTTACTTTAAGGTCACAGAACGCTAGTGACCAACAACGGAAGAAGAATGACCAGGAACGTGTTTTGAAGTTTATGACAGATCACCAACCACATGTTGTTGTTTTAGGTGCAGTGAATTTGTCTTGCACTCGTTTAAAGGAAGATCTATATGAGGCTCTTATAATTCATTTGATCCATGTATATAACCCCGTTACTGAGGAAAAGACTTTGATGTTGTTGCATCTTGTCATTTTTAAGATGGTAGAGGAAAACCCTAGGGATGTTGGGCATGAAATGGACGGGCTCAGCATTGTGTATGGCGATGAATCTCTTCCCCGTCTTTATGAAAATTCTCGAATTTCCTCTGAACAACTTCCTTCACAGCAAGGTATAGTCAGGCGGGCTGCTGCTCTTGGCCGATATCTCCAGAACCCATTGGCAATGGTTGCAACCTTATGTGGACCCAGAAGGGAAATATTATCATGGAAACTGAACTCTTTGGAGAGCTTTCTCAACCCAGATGATAAATTTGGGATGGTTGAGCAGGTTATGGTAGATGTGACCAATCAGGTCGGCTTAGACATTAATTTAGCAATAAGTCACGAGTGGTTATTTTCTCCTTTACAATTTATTTCTGGGCTTGGTCCACGGAAGGCTGCATCCTTACAGAGATCCTTGGTAAGAGCTGGTGCAATTTTTACCAGGAAGGATTTTTTGAAAGAGCATAAGCTGGAGAAAAAGGTTTTTGTCAATGCGGTTGGTTTCTTGCGTATTCGGCGAAGTGGGTTGGCTGGTAGCAGCAGCGAATATATTGATTTGCTGGATGATACAAGAATTCATCCAGAATCATATGCTATTGCACAAGAGTTGGCCAAAGATGTGTATGATGAGGATGGCACAGGTGATGCAAATGATGATGATGATGCATTGGATTTGGCCATAGAGCATGTTAGAGAAAGACCTAGTTATTTGAAAAACCTTGATGTTGTGGAATATGCTACTGCGAAAGAAGAACAAAAAAAGAAACAACCACAAACCGCTATTAACCTTCTTAAGAAAATAGAAACTTTGCATGAGATAAAAAGTGAATTGATTCATGGTTTTCAGGATCGTCGTAAGCAATATGAAGAACCAAGTCAAGATGAGGAATTTTATATGATTTCAGGTGAGACTGAGGAGACTCTTGCTGAAGGTAAAATTGTCCAAGCCACAGTTCGCAGAGTGCAGGCCCAGAAAGCAATATGTGGGCTTGACTCTGGAATGACTGGAATCCTGATGAAAGAAGACTATTCAGATGAATATAGAGATATAATTGAATTATCTGATAGGCTACATGAAGGTGACATGCTCACATGTAAAGTCAAGTCAATTCAAAAAAATAGATATCATGTTTTCCTCGTTTGTAAGGATAGTGAAATGAGAAGTAATCGGCTACAGAACAGCCATTATTTTGACCCTTATTACCATGAAGACGTACGCAGTTTGCAGAGTGAACATGACAAAGCTCGGAAAGAAAAAGAGCTTGCAAAGAAGCGTTTCAAGTCAAGGATGATAATTCATCCCCGCTTTCAGAACATAACTGCAGATGAAGCAATGGAGATATCAGATTCAAATAAATCAGTTGTGGTTCTTGTTCTCAGGTTTTTGTCTAACAAAGAACCTGGAGAAAGCATTATCCGCCCTAGCTCGCGGGGACCAGAGTGTCTTACTCTAACTCTCAAAATTCATGACGGGGTATATGCCCACAAGGAAATAGTTGAAGGCGGAAAGGAGCGCAGGGATATTACAAGCTTACTTCAAATTGGGAAGACACTGAAAATTGGAGATGACACGTTCGAGGATTTAGATGAGGTAATGGACCGTTATGTTGATCCCCTGGTGACTCACTTGAAGGCAATGTTAAACTACCGCAAGTTCAGAAGGGGCACAAAGGCAGAAATTGATGAACTTTTGAGGATAGAAAAAACTGAGAATCCAATGCGCATAGTCTACAGTTTTGGCATCTTGCATGAACATCCTGGCACATTTATATTAACTTATATAAGGAGTACAAATCCGCACCATGAGTATATTGGGCTTCATCCAAAAGGGTTCAGGTTCCGGAAAAAGATGTTTGAGGACATTGATCGGCTCGTGGCTTATTTTCAGAGGCATATCGATGATTCCCAACATGATTCAACCCCCTCTATTAGATCTGTTGCTGCTATGGTACCAATGCGAAGTCCTGCAGCTGGTGGCTCATCAGGGGCATCTGCAGGTGGCGGCTGGAGTGGTTCACACAGTGAGGGTGGTCGGAGAGGTCATTCTTATGATAGGGATCGATCTTCTACTCCTGGTTCCAGGACAGTTAGACCTGGGCGGGCTGATTATAGAAACAATGGGAATCGAGATGAGCACCCCAGTGGACTGCCTCGTCCATACGGTGGTGGCCGTGGCCGTGCTCGAGGTTCTTATAACGACAACAGAGGACATAGCTCCAATAATGAAAGGCAGGACTCTGGCTATGCTGGGGGCAGATGGGTTTCTAACACACGGGAGGGGGGTGATGGTTTAAGCAATTTTCCAGGAGCTAAGGTTCAAAATTCCCCTGGAAGGGAAGCTTTTCCTGGTGGTTGGGGTGGTGGATCCGGTTCAGGTGATGCTGAACATGGAAGCTCTGGGTCGGGAACTGGCTCTAAGAAAGTATCTGACAGTGGGTGGGGGTCTGCAATTGCCGGTGGCGGTGGCTCTGGTTGGTGA 5025 0.4334 MARGVISDDEDEVELDEEEREPVDGDGLDEGRDVDDDEEDEEEEGQDEYENDGFIVDEDEEEQDEEERAESDEERQKRRKKKRKEEYILDEDDYELLEDNNINIHRRKDIKKFKRLKKGQRDTEEEPSGLSDEEVFVGGGKVGRTAEEKLKHRLFGDDEGAPLEDIAEDEEQGEEEEDADIGEDDEMADFIVDEEEVDENGAPMRRTKPKKKTRQAPGVSSSAVQEAQDIFGDVDNLLLTRKKNKDLNEYTETRLEDEFEPIILSDKYMRKEDDQIREVDLPERMQISEMSTGTPPLDGSIDEESQWIVKQLSEGAVPWICKKNPTSQNNRKNLPIDENDIIRFLELYHVQKLDIPFIAMYRKEECLSLLKDIERPEAGGESSDKNNMTPTLKWHKVLWALLDLDRKWLLLQKRKGALESYYTKRFEEESRRIYDETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNLHFPPGEAGVDEGQYKRPKRKSVYSTYSKAGLWEVANRFGCSSEQLGICLSEVKVPELVDPKETPEEMASNFTCAMYNTPEEVLKCARHMAAIEVSCEPSIRKHVRSHFLDHAVVSTCPTADGNAAIDSFHDFAVVKWLREKPLSKFDDAQWLLIQKAEEEKLLQVTIKLPEENLNKLIDQFNEYYVSDSVSRSAQLWNEQRKSILHDAIFRLLLPSMEKEARGVLASKAKNWLLMEYGKALWNKVSVGPYQQKENDLSSDDEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTLRSQNASDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDLYEALIIHLIHVYNPVTEEKTLMLLHLVIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAAALGRYLQNPLAMVATLCGPRREILSWKLNSLESFLNPDDKFGMVEQVMVDVTNQVGLDINLAISHEWLFSPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFLKEHKLEKKVFVNAVGFLRIRRSGLAGSSSEYIDLLDDTRIHPESYAIAQELAKDVYDEDGTGDANDDDDALDLAIEHVRERPSYLKNLDVVEYATAKEEQKKKQPQTAINLLKKIETLHEIKSELIHGFQDRRKQYEEPSQDEEFYMISGETEETLAEGKIVQATVRRVQAQKAICGLDSGMTGILMKEDYSDEYRDIIELSDRLHEGDMLTCKVKSIQKNRYHVFLVCKDSEMRSNRLQNSHYFDPYYHEDVRSLQSEHDKARKEKELAKKRFKSRMIIHPRFQNITADEAMEISDSNKSVVVLVLRFLSNKEPGESIIRPSSRGPECLTLTLKIHDGVYAHKEIVEGGKERRDITSLLQIGKTLKIGDDTFEDLDEVMDRYVDPLVTHLKAMLNYRKFRRGTKAEIDELLRIEKTENPMRIVYSFGILHEHPGTFILTYIRSTNPHHEYIGLHPKGFRFRKKMFEDIDRLVAYFQRHIDDSQHDSTPSIRSVAAMVPMRSPAAGGSSGASAGGGWSGSHSEGGRRGHSYDRDRSSTPGSRTVRPGRADYRNNGNRDEHPSGLPRPYGGGRGRARGSYNDNRGHSSNNERQDSGYAGGRWVSNTREGGDGLSNFPGAKVQNSPGREAFPGGWGGGSGSGDAEHGSSGSGTGSKKVSDSGWGSAIAGGGGSGW 1674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0931 1674 MobiDBLite consensus disorder prediction 1581 1595 - -
Lal8g0931 1674 MobiDBLite consensus disorder prediction 161 197 - -
Lal8g0931 1674 SMART rnase_8s 736 878 IPR006641 GO:0006139
Lal8g0931 1674 SMART S1_6 1158 1231 IPR022967 -
Lal8g0931 1674 SUPERFAMILY RuvA domain 2-like 931 1021 IPR010994 -
Lal8g0931 1674 SUPERFAMILY RuvA domain 2-like 1034 1135 IPR010994 -
Lal8g0931 1674 Gene3D SH2 domain 1394 1491 IPR036860 -
Lal8g0931 1674 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT6 83 1646 IPR017072 GO:0032968
Lal8g0931 1674 CDD SH2_Cterm_SPT6_like 1395 1481 IPR035018 -
Lal8g0931 1674 Coils Coil 1254 1274 - -
Lal8g0931 1674 Gene3D - 484 953 IPR023323 -
Lal8g0931 1674 ProSiteProfiles S1 domain profile. 1160 1231 IPR003029 GO:0003676
Lal8g0931 1674 MobiDBLite consensus disorder prediction 9 69 - -
Lal8g0931 1674 Gene3D - 292 483 IPR023319 -
Lal8g0931 1674 Pfam SH2 domain 1249 1480 IPR035420 -
Lal8g0931 1674 Gene3D - 1029 1133 IPR042066 -
Lal8g0931 1674 Gene3D - 259 1023 - -
Lal8g0931 1674 MobiDBLite consensus disorder prediction 144 160 - -
Lal8g0931 1674 MobiDBLite consensus disorder prediction 1502 1674 - -
Lal8g0931 1674 MobiDBLite consensus disorder prediction 115 224 - -
Lal8g0931 1674 Gene3D - 1153 1241 IPR012340 -
Lal8g0931 1674 SUPERFAMILY Nucleic acid-binding proteins 1155 1235 IPR012340 -
Lal8g0931 1674 Gene3D - 726 1152 IPR037027 GO:0006139
Lal8g0931 1674 MobiDBLite consensus disorder prediction 70 90 - -
Lal8g0931 1674 MobiDBLite consensus disorder prediction 1643 1659 - -
Lal8g0931 1674 Pfam Acidic N-terminal SPT6 35 122 IPR028083 -
Lal8g0931 1674 CDD SH2_Nterm_SPT6_like 1282 1384 IPR035019 -
Lal8g0931 1674 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT6 83 1646 - -
Lal8g0931 1674 SUPERFAMILY Ribonuclease H-like 736 915 IPR012337 -
Lal8g0931 1674 Pfam Helix-hairpin-helix motif 919 1020 IPR032706 -
Lal8g0931 1674 PIRSF Spt6 3 1543 IPR017072 GO:0032968
Lal8g0931 1674 Gene3D SH2 domain 1268 1393 IPR036860 -
Lal8g0931 1674 SUPERFAMILY Tex N-terminal region-like 331 715 - -
Lal8g0931 1674 Coils Coil 55 76 - -
Lal8g0931 1674 MobiDBLite consensus disorder prediction 1 93 - -
Lal8g0931 1674 MobiDBLite consensus disorder prediction 1526 1540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0931 Lal-Chr8 7007353 7017656 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0931 K11292 - gmx:100809136 2459.49