Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0597 ATGCTGGAAACAATGGAAAGTTCAGTGAACGGTGGTGGTGGGTTTTCACAGTCGCAGTTAATTAGTTGCGGAGATAGCAGTGAAGAGGAGCTATCTGTGTTGCCACGTCATACTAAAGTGGTTGTAACCGGAAACAACCGAACCAAATCAGTTCTCGTTGGTCTCCAAGGAGTTGTTAAGAAAGCCGTTGGACTCGGTGGATGGCATTGGCTTGTTCTTACCAATGGAATTGAAGTGAAGCTGCAGAGGAACGCTCTTAGCGTGATTGAACCACCCACTGGGAATGAGGAAGATGATGACCTTGAATTTGAGAATGTGACATGGAATGGATCGGATATGGCATCGGATGACACTCTCAAATCCCACAGATCCAGGCCCAGAATGCATAGATCATTGGGATCATCTCAGAGGACTATGAACAGGTTCTTCTCTGCTGATTCACAATCTAAGGGGTCCATAACTATGCCTCATGGGTGGATGAAGGTTGACTTGAGCAAATTGGAGATGGCTGCATTGTGGAGATATTGGCGACACTTCAATCTGGTGGATGCTGTCCCAAACCCATCAAAAGAGCAGTTAGTAGATGTTGTTCAGAGACATTTCATGTCTCAGCAAATGGACGAGTTGCAAGTGATTATGGGATTTGTCCAAGCTGCAAAGAGGCACAAGACTAAGTTCAAGTGA 684 0.4561 MLETMESSVNGGGGFSQSQLISCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEPPTGNEEDDDLEFENVTWNGSDMASDDTLKSHRSRPRMHRSLGSSQRTMNRFFSADSQSKGSITMPHGWMKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQMDELQVIMGFVQAAKRHKTKFK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0597 227 PANTHER SAP30 1 225 IPR024145 -
Lal8g0597 227 MobiDBLite consensus disorder prediction 114 133 - -
Lal8g0597 227 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 167 220 IPR025718 GO:0005515
Lal8g0597 227 Gene3D - 143 227 IPR038291 -
Lal8g0597 227 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0597 Lal-Chr8 4129989 4133172 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0597 - - gmx:100809195 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0597 8 4129989 4133172 Lal8g0597 8 4129989 4133172 ECH