Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0561 ATGGTGAAACATTGGATTTCATCAATGCCACCGAATAAGCGTCGAGGTCTTATAATGATAGTACTCGCACTCTTATCCCTCTCTATGATCGCGCTTCTTTTCACCGAAACCATTACCTATTCTTCCCTGTACAATAACAATGTTACAATAGACCCTCAGATTAAAACGACGTCGTCTCAATCGAACCCTCTAGAGTTTATGAAGTCGAAGCTGGTTCTTATGGTGTCGCATGAGTTGTCTCTTTCAGGAGGTCCTCTGTTGCTAATGGAATTAGCGTTTCTGTTGAGGGCTGTTGGAAGCGACGTCGTTTGGATCACTAATCAAAAACCCGCTCAACACGACGACGTCGTTTTGGCTTTGGAGAATAAAATGTTCGACAAGGGAGTCCAGGTGCTGCCTGCCAAAGGTGAAAAGGCTGTAGATATGGCTCTAAAGGCTGATCTGGTCATCTTAAATACTGCTGTGGCTGGGAAGTGGCTTGATGCTGTTCTCAAGGAAAACGTTATGGTGGTTCTTCCGAAGATTTTGTGGTGGATTCATGAAATGCGAGGGCATTATTTCAAAGTGGAGTATGTTAAGCACCTCCCTTTTGTTGCTGGTGCCATGATTGATTCACATGTGACTGCTGAATACTGGAAGAATAGGACTAGGGAGCGTTTAGGGATTAAAATGCCGGAAACTTATGTTGTGCATCTTGGAAATAGCAAAGAACTTATGCAAATTGCAGAAAATAGTGTGGTAAAGAGGGCTCATCGTGAGCATGTCCGACAATCTCTTGGAGTGAGAAATGATGATATACTTTTTGCCATTATAAATAGTGTTTCACGTGGTAAAGGACAGGATCTATTTCTTCATTCCTTTCATGAAAGTCTGCAACTCATCCAGGAGAAGAAACTGCAGATGCCTTCTTTGCACGCTGTAGTTGTAGGGAGTGATATGAATGCTCTGCCAAAGTTTGAAATGGAATTGCGTAAATTTGTCATGGAGAAAAAAATCCAGGATCGCGTTCACTTTGTTAACAAAACCCTGGAAGTGGCTCCTTACCTTGCTTCTATGGATGTTCTTGTTCAGAATTCTCAGGCACGAGGAGAATGTTTTGGGAGGATAACCATTGAAGCAATGGCATTTTGCTTGCCTGTACTGACGTGTGCAACCACCCTCTCCTCCCCCTCAGAGCTATTTCAATTTTCATGGCCTTTGTATATGGTCTCATTCAAGCAACAAGTTGCCTTTTTGGGAACTGCAGCTGGGGGCACCATGGAGATTGTGGTAAATCAGACAACTGGTTTACTGCATCCTGTCGGAAAAGAAGGCGTGACACCTCTTGCAAATAACATTGTGAATTTAGCAACTCATGCTGAGAAGAGGCTGAGTATGGGAAAGAAAGGATATGAGAGAGTAAAGGAGATGTTTCTGGAGCACCATATGGCACATAGAATTGCATTGGTCCTGAAGGAAGTCTTACAGAAGGGTAGCCACAATTAA 1485 0.4316 MVKHWISSMPPNKRRGLIMIVLALLSLSMIALLFTETITYSSLYNNNVTIDPQIKTTSSQSNPLEFMKSKLVLMVSHELSLSGGPLLLMELAFLLRAVGSDVVWITNQKPAQHDDVVLALENKMFDKGVQVLPAKGEKAVDMALKADLVILNTAVAGKWLDAVLKENVMVVLPKILWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHVTAEYWKNRTRERLGIKMPETYVVHLGNSKELMQIAENSVVKRAHREHVRQSLGVRNDDILFAIINSVSRGKGQDLFLHSFHESLQLIQEKKLQMPSLHAVVVGSDMNALPKFEMELRKFVMEKKIQDRVHFVNKTLEVAPYLASMDVLVQNSQARGECFGRITIEAMAFCLPVLTCATTLSSPSELFQFSWPLYMVSFKQQVAFLGTAAGGTMEIVVNQTTGLLHPVGKEGVTPLANNIVNLATHAEKRLSMGKKGYERVKEMFLEHHMAHRIALVLKEVLQKGSHN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0561 494 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 1 385 - -
Lal8g0561 494 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 407 491 - -
Lal8g0561 494 Pfam Glycosyl transferases group 1 253 384 IPR001296 GO:0016757
Lal8g0561 494 Gene3D Glycogen Phosphorylase B; 410 471 - -
Lal8g0561 494 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 412 489 - -
Lal8g0561 494 PANTHER GLYCOSYLTRANSFERASE 407 491 - -
Lal8g0561 494 PANTHER GLYCOSYLTRANSFERASE 1 385 - -
Lal8g0561 494 Gene3D Glycogen Phosphorylase B; 239 398 - -
Lal8g0561 494 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 72 386 - -
Lal8g0561 494 CDD GT4_PimA-like 96 485 - -
Lal8g0561 494 Pfam Glycosyl-transferase family 4 68 246 IPR041693 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0561 Lal-Chr8 3889653 3902119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0561 60 489 Glycosyltransferase AT1G75420 74.651 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0561 - - aprc:113847885 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0561 8 3889653 3902119 Lal8g0561 8 3889653 3902119 ECH