Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0512 ATGGCAATGAATGTTCATTTTCTCCTTAGCGTTTTACTCATTCTTAATTCAGTGATAATCTTTGAAGCTACTACTCATATTTATACATCCCTCAACAGAAGCAGTTTCCCACAAGGTTTTATTTTTGGTACAGCATCATCTGCTTATCAGTATGAAGGTGCATCAAACTTAGGAGGGAGAGGACCAAGCATATGGGATACTTTCACTCATGATTATCCAGGTAAGATTAAGGACAGAAGTAACGGAGACAAATCCATTGATGAATACCATCGTTATAAGGAAGATATTGATATCATGAAGAATATGAACATGGATGCTTTTAGATTCTCCATCTCTTGGTCCAGAATACTACCAAAGGGAAAGCTTAGTGGAGGTGTGAACAAGGAAGGAATCAAGTATTACAATAACCTCATCAATGAGCTGCTAGCCAAAGGACTAGAACCCTTTGCAACCATTTTTCATTGGGACCTTCCTCAGGCCTTAGAAGACGAATATGGTGGCTTTTTAAGTCATAATATAGTGAATGATTTTCAAGACTATGCAGAAATTTGCTTTAAGGAATTTGGAGATAGGGTAAAACATTGGATTACATTGAATGAGCCATGGGTATTTACCAAATTTGGATATGCACAAGGGGAGACTGCACCAGGAAGATGTTCAACATGGCAAAACCTGAATTGCAGTGGTGGAGATTCAGCCATTGAACCATACATAGTGTCTCACAATCAATTACTTGCTCATGCAGCTGCTGTCAGTGTTTATAAGACTAAGTATCAGACTTATCAAAAGGGTTGGATAGGGATATCATTAGCAAGTCACTGGATTATGCCACTAAATGATACAATACTTAACCATCAAGCATCAGAAAGAGCCCTTGATTTCATGCTTGGATGGTTTATGGAACCATTGACAATAGGAGATTACCCAAGTTCCATGCAATCTTTGGTAGGAAAACGATTACCAAAGTTTTCTACACATCAATCTAGGCTTGTAAGAGGGTCCTTTGATTTTATTGGAATAAATTACTATACTTCTTATTATGCTACCAATGCACCTCAATTAAGTGAAGCCAGACCAAACTATCTCACTGACTCTCTTGTTAACCTTTCATCTGAACGTAATGGAAGATTTATTGGTCCAAAGAGTGCTTCAGGTTGGTGTGTTTATCCAAAAGGAATTCGCGAGCTGTTGCTATATACAAAAAATAAATACAACAACCCTTTGATCTATATCACAGAAAATGGTGTTGATGAGTTCAATGATCCAACATTATCCCTTGAGGAAGCCCTTAGGGATATACCAAGAATTGATTATTATTATCACCATCTCTATTTTCTTCAAACAGCAATTAAGGATGGTGTAAATGTAAAAGGATATTTTGCATGGACATTGCTTGACAACTTCGAATGGTTTTCTGGCTACACTGTGAGGTTTGGAACTTATTTCATAGATTACAACAATGACCTGAAAAGACATCCAAAATTGTCAGCAATATGGTTTAGGAAATTCCTACAGCATAATATACTTGCATATGATGCTTAG 1542 0.3696 MAMNVHFLLSVLLILNSVIIFEATTHIYTSLNRSSFPQGFIFGTASSAYQYEGASNLGGRGPSIWDTFTHDYPGKIKDRSNGDKSIDEYHRYKEDIDIMKNMNMDAFRFSISWSRILPKGKLSGGVNKEGIKYYNNLINELLAKGLEPFATIFHWDLPQALEDEYGGFLSHNIVNDFQDYAEICFKEFGDRVKHWITLNEPWVFTKFGYAQGETAPGRCSTWQNLNCSGGDSAIEPYIVSHNQLLAHAAAVSVYKTKYQTYQKGWIGISLASHWIMPLNDTILNHQASERALDFMLGWFMEPLTIGDYPSSMQSLVGKRLPKFSTHQSRLVRGSFDFIGINYYTSYYATNAPQLSEARPNYLTDSLVNLSSERNGRFIGPKSASGWCVYPKGIRELLLYTKNKYNNPLIYITENGVDEFNDPTLSLEEALRDIPRIDYYYHHLYFLQTAIKDGVNVKGYFAWTLLDNFEWFSGYTVRFGTYFIDYNNDLKRHPKLSAIWFRKFLQHNILAYDA 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0512 513 PRINTS Glycosyl hydrolase family 1 signature 334 348 IPR001360 GO:0004553|GO:0005975
Lal8g0512 513 PRINTS Glycosyl hydrolase family 1 signature 409 417 IPR001360 GO:0004553|GO:0005975
Lal8g0512 513 PRINTS Glycosyl hydrolase family 1 signature 432 443 IPR001360 GO:0004553|GO:0005975
Lal8g0512 513 PRINTS Glycosyl hydrolase family 1 signature 453 470 IPR001360 GO:0004553|GO:0005975
Lal8g0512 513 PRINTS Glycosyl hydrolase family 1 signature 477 489 IPR001360 GO:0004553|GO:0005975
Lal8g0512 513 Gene3D Glycosidases 20 506 - -
Lal8g0512 513 SUPERFAMILY (Trans)glycosidases 27 505 IPR017853 -
Lal8g0512 513 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 40 54 IPR033132 -
Lal8g0512 513 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 8 509 - -
Lal8g0512 513 Pfam Glycosyl hydrolase family 1 34 507 IPR001360 GO:0004553|GO:0005975
Lal8g0512 513 PANTHER GLYCOSYL HYDROLASE 8 509 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0512 Lal-Chr8 3510981 3516864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0512 8 506 Glycoside Hydrolase AT5G44640 54.291 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0512 - K01188 gmx:100792870 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0512 8 3510981 3516864 Lal8g0512 8 3510981 3516864 ECH