Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0477 ATGGCGAATCTGAAAGCAGAGATCTTTGAGCTCAACAATGGAACCATGCAAGTTCTCGTTTCCAATCTTGGCTGCACAATTATCTCATTATCTGTACCCGACAAAGATGGAGTTTTGTCCGATGTTGTTCTTGGTCTCGACTCTCTTGATTCTTATCAGAAAGGTCTTGCTCCTTATTTTGGCTGCATTGTTGGTCGTGTTGCAAATCGAATCAAGGATGGGAAGTTTACACTAGACGGGGTTGAATACTCTTTGCCTGTCAACAGGCCTCCAAACAGTCTCCATGGTGGACATGTTGGGTATGATAAGAAGGTATGGGAGGTAGTTGAATATAGGAAAGGTGAAACCCCATCAATCACTTTCAAGTATCACAGTCATGATGGAGAGGAAGGTTATCCTGGGGATATCACTGTTACTGCAACTTACACACTCACCTCAAACACAACCCTGAGGCTTGACATAGAAGGTGTGCCAAAGGACAAACCAACCATAATCAACTTAGCTCAGCATACATACTGGAACTTAGCTGGCCACAACAAAGGGAACATACTTGACCATTCGATTCGGATACCGGCTAATCACGTAACTCCGGTTGATCAGAATACTGTGCCAACTGGTGAAATCATGCCTGTGAAAGGTACCCCCTTTGATTTCACTTCTGAAAAGAGAATAGGCAACACAATCAATGAGGTTGGATTAGGATATGACCACAATTATGTCCTTGATTGTGGAGAGGAGAAAGCAGGTTTAAGACATGCTGCAAAAGTGAGAGATCCATCAAGTTCAAGGGTGCTAAACTTGTGGACAAATGCCCCTGGCATGCAGTTTTACACTGCGAATTACGTTAATGGCGTTGCCGGAAAAGGAGGTGCTGTCTATGAAAAGCATGCTGCGTTGTGTTTGGAGACACAGGGGTACCCCAATTCTATAAATCAGCCAAATTTCCCATCTATTGTGGTTAGACCTGATGAGAGATATCAGCATACAATGTTGTATGAGTTTTCAATTGAGTCAAGTTAA 1020 0.4314 MANLKAEIFELNNGTMQVLVSNLGCTIISLSVPDKDGVLSDVVLGLDSLDSYQKGLAPYFGCIVGRVANRIKDGKFTLDGVEYSLPVNRPPNSLHGGHVGYDKKVWEVVEYRKGETPSITFKYHSHDGEEGYPGDITVTATYTLTSNTTLRLDIEGVPKDKPTIINLAQHTYWNLAGHNKGNILDHSIRIPANHVTPVDQNTVPTGEIMPVKGTPFDFTSEKRIGNTINEVGLGYDHNYVLDCGEEKAGLRHAAKVRDPSSSRVLNLWTNAPGMQFYTANYVNGVAGKGGAVYEKHAALCLETQGYPNSINQPNFPSIVVRPDERYQHTMLYEFSIESS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0477 339 PANTHER ALDOSE-1-EPIMERASE 5 336 - -
Lal8g0477 339 CDD galactose_mutarotase_like 12 334 - -
Lal8g0477 339 Gene3D - 2 337 IPR014718 GO:0030246
Lal8g0477 339 PANTHER ALDOSE 1-EPIMERASE 5 336 - -
Lal8g0477 339 SUPERFAMILY Galactose mutarotase-like 6 335 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lal8g0477 339 PIRSF GALM 2 337 IPR015443 GO:0016853|GO:0019318
Lal8g0477 339 Pfam Aldose 1-epimerase 9 332 IPR008183 GO:0005975|GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0477 Lal-Chr8 3207466 3210449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0477 5 335 Miscellaneous Gene Families AT3G47800 49.245 4.32e-108 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0477 K01785 - gmx:100776238 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0477 8 3207466 3210449 Lal8g0477 8 3207466 3210449 ECH