Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0476 ATGGAGTGTGGAAAAGTGGTTGGGTTCGTTGGGTTGGATCAATTGAGCTTCAAAATCGCCTCATCGCTCATTTCTCATGGCTATGCTCTCCAAGCTTTTGAGATAAGCGATCCCACGATAGAAGAACTCTTGAAGCTTGGAGGAACTAGATGTTCAAGCCCTTGTGAAGCAGGGAGAGATGTTGCTGCTTTAGTTGTCCTAATTTCTCATGTGGATCAAATTAAAGATCTAATTTTTGGTGATGAGGGTGTTTTGAAAGCCCTAAAATCGGATACAGTTCTTATTCTCCGTTCAACCATATTACCATCAGCTCTCCATAAACTGGAGAAGGATCTGGCAGAAATTCATGAGATATCTTATATTGTTGATGCATATGTCTCTCATGGGAGGTCTGATGCTACGAATGGAAAAGTTACTATTGCATCATCCGGAAGACCAGATGCCATCGCAAGAGCACGACCTTTGCTTTCTGCAATGTGTGAAAATCTTTTTACTTTTGATGGTGAAATTGGTGGAGCCAGTAAGGTTAAAATGGTTACTGAGCTGCTAGAGGCCATTCACTTCATTGCTTCTGTGGAGGCTCTCTCTCTTGGTACTAGAGCTGGTATTCATCCGTGGATAATCTATGATATAATTTCCAATGCTGCTGGAAATTCGTGGTGCGTGGTATTCAAGAATAATGTTCCTCTATTGTTAAAGGGAGAGGTTAAGCATCACATTCTAAAATCTCTTGTTAAGGAGCTGGAAATCATTTTGGATATGGCCAAGTCACTTACTTTTCCACTTCCACTTTTGGCTGCTACTCATCAACAACATATTCATGGTGTTTCAGTTTCACCTGTTTGTTGTGAAGATGATGATGGTACAGCATTGATTAAGGTTTGGGAAAACATTTATGGGGTGAAAATTTCAGATGCTGCAAATGCAGATGCGTACAGCCCTGAAAAACTGGCATCTGAAATTACAGCTGATTCTAAGACTGTAAGACGGGTTGGTTTTATTGGCCTTGGAGCAATGGGATTTGGCATGGCGACTCACTTGCTGAGTTTAAATTTCAGCGTAGTTGGTTATGATGTGTATAAACCAACTCTAATTCGATTTGCAAATGCTGGTGGCTTGATTGGAAATTCTCCAGCAGAAGTGGGTAAAGATGTTGATGTCCTCATAATCATGGTCACAAACGAAGCTCAAGCAGAGAGTGCTTTATATGGAGAATATGGTGCAGTTTCAGTTCTTCCACCAGGAGCATCTGTCATTCTTTCTTCCACTGTTTCTCCTGCATATGTGACTCAGCTGGAGCGCAGATTACATAATGAAGGTAAGAATTTGAAGCTGGTGGATGCCCCTGTTTCGGGCGGTGTTAAGAAGGCCTCAATGGGAACACTTACGATAATGGCTTCGGGATCCAATGCTGCCCTTAAGGATGCTGGTTTAGTCTTAGCAGCCTTGAGTGAGAAGCTTTATGTTATCAAAGATGGCTGCGGTTCTGGAAGTGGAATAAAGATGGTCAACCAATTGCTTGCTGGAGTTCATATAGCATCAGCAGCTGAGGCAATGGCTTTTGCAGCACGATTGGGTCTGAATACGAGAATGCTGTTTGATTATATAACCATTAGTGGGGGAACATCCTGGTATGTGTCTTCCACGAAGATGTTTGAAAATCGTGTCCCCCACATGCTAGACAATGATTACACACCATATTCAGCACTTGATATCTTTGTTAAGGACCTGGGAATTGTTACTCGTGAATCATCTTCTTGGAAAGTACCACTTCACCTATCAGCTACTGCTCACCAACTATATCTATCAGGTTCTGCTGCTGGTTGGGGACGTCAAGATGACGCTGGTGTGGTGAAGGTTTATGAAACATTAACTGGTGTTAAAGTTGAAGGAAAACCACAAGCTCTAAAGAAAGACGTTGTGTTGCATTCTCTTCCACCCGAGTGGCCACAAGATCCTCTTCCTGATATAAGGAGACTAAACGAAATAAGCTCAAAGGTTTTGATTGTTCTAGATGATGATCCAACAGGAACACAAACTGTTCATGATATTGAGGTATTAACAGAATGGAGTATTGAGTCACTGATCGAGCAGTTTAGAAAAGGTCCAAAATGCTTTTTCATTTTGACAAACTCCAGGTCACTGAGTTCTGAGAAGGCAAGTGCATTGATAAGAGAAATTTGCAGAAATCTAGCTACTGCAGCAAAATCAGTTGACAACATTGATTATACAGAAGCGGATGCTGCTGTTTCAGTATTGGGTGAAATGGATGCATGGATAATTTGTCCCTTTTTCCTTCAAGGTGGCCGTTACACTATTGAAGACATACACTATGTTGCTGATTCTGATAACCTTCTTCCTGCAGGGGACACAGAGTTTGCTAAAGATGCTGCCTTTGGCTACAAATCTTCAAATCTGCGCAATTGGGTAGAGGAGAAGACTGATGGACGAATACCTGCAAGTGCTGTTGAATCCATTTCTATCCAACTTTTGAGGAAAGGGGGACCAGATGCAGTTTGTCAGCATCTATGCAATTTGAAGAAGGGATCAATATGTATAGTTAATTCAGCTAGTGAAACAGATATGGCTGTATTTGCACTTGGAATGATCAAGGCAGAATTGATGAAGAAGCGTTTCTTAAGTCGCACTGCTGCTAGTTTTGTTTCTTCCCGCATTGGAATCATCTCTAAGCCTCCAATATTGCCAAAGGATCTCGGAATATCTAGACAAAGGAATGGGGGTTTGATAGTTGTGGGATCATATGTTCCAAAAACAACCAAGCAGGTTGAAGAGCTTAAATTACAGTGTGGTCAGTTTTTAAGAAGCATTGAGGTATCGGTTGAAAAACTTGTGATGCAGCCTATTGAGGAGAGGGAGGAAGAAATCAGTAAAACAGCTCAATTGGCAGATGTATATCTTAAAGCTCATAAAGACACTCTTATATTGACTAGCCGGAATCTCATAACTGGAAAAACAGCCTCTGAAAGTTTGGACATAAACTTCAAAGTCAGTTCTGCTTTGGTGGAAATAGTGAAAAGGATAACTACAAAACCTCGTTATATACTAGCAAAGGGTGGTATTACCTCTTCAGACCTTGCTACAAAAGCCCTTGGTGCAAAGTGTGCCAAGATAGTTGGACAAGCACTTGCCGGCATTCCCTTGTGGCAATTAGGCAGTGAAAGTAGACATCCTGGAGTTCCATACATTGTTTTCCCTGGTAATGTTGGTGACAGCAGATCATTGGCAGAAGTTGTGAGGTCTTGGACTCGTCCAACCAGACTTTCTTCAACAAAAGATATTCTTAACAACGCAGAAAAGGGTGGATATGCTGTTGGAGCATTTAACGTCTATAATTTGGAAGGCGTTGAGGCTGTTGTTTCTGCTGCAGAGGAAGAACAAAGCCCTGCTATATTACAGATCCATCCTGGTGCCTTGAAGCAAGGAGGAATTCCCTTGGTTGCTTGTTGCATTTCTGCTGCAGAGCAAGCCAGTGTTCCCATCACTGTTCACTTTGATCATGGGACTTCAAAGCAAGATCTCGTGGAAGCTCTTGATCTGGGATTCAGTTCTGTGATGGTTGATGGTTCACATCTTTCTTTCAATGAAAATGCTGCATACACAAAATTTATATCATCACTGGCTCACTCAAAAGATATTTTGGTCGAAGCTGAGCTAGGGAGATTGTCAGGGACAGAAGATGATTTAACGGTTGAAGAATATGAAGCCAAGCTAACTGATGCTAATTTGGCACAAAAATTCATTGATGAGACTAGCATAGATGCTTTGGCAGTCTGTATTGGAAATGTGCATGGAAAATACCCCGCAAGTGGTCCAAAACTCAGATTTGATTTGCTTAAGGAACTGCATGCTTTGAGCTTGAAGAAAGGGATTTTTCTGGTGCTTCACGGAGCATCAGGCTTGTCCAAAGAGCTTATTAAGGAATGCATAAACCTTGGTGTTAGAAAGTTCAATGTCAACACTGAAGTGAGGAAGGCATACATGGACTCCCTCATTACTCCCAAGAGTGATTTAGTTCATGTTATGGCTTCTGCCAAGGATGCTATGAAAGCTGTGGTTGCAGAAAAGATTCATCTCTTTGGCTCAGCAGGAAGGGCATGA 4119 0.4178 MECGKVVGFVGLDQLSFKIASSLISHGYALQAFEISDPTIEELLKLGGTRCSSPCEAGRDVAALVVLISHVDQIKDLIFGDEGVLKALKSDTVLILRSTILPSALHKLEKDLAEIHEISYIVDAYVSHGRSDATNGKVTIASSGRPDAIARARPLLSAMCENLFTFDGEIGGASKVKMVTELLEAIHFIASVEALSLGTRAGIHPWIIYDIISNAAGNSWCVVFKNNVPLLLKGEVKHHILKSLVKELEIILDMAKSLTFPLPLLAATHQQHIHGVSVSPVCCEDDDGTALIKVWENIYGVKISDAANADAYSPEKLASEITADSKTVRRVGFIGLGAMGFGMATHLLSLNFSVVGYDVYKPTLIRFANAGGLIGNSPAEVGKDVDVLIIMVTNEAQAESALYGEYGAVSVLPPGASVILSSTVSPAYVTQLERRLHNEGKNLKLVDAPVSGGVKKASMGTLTIMASGSNAALKDAGLVLAALSEKLYVIKDGCGSGSGIKMVNQLLAGVHIASAAEAMAFAARLGLNTRMLFDYITISGGTSWYVSSTKMFENRVPHMLDNDYTPYSALDIFVKDLGIVTRESSSWKVPLHLSATAHQLYLSGSAAGWGRQDDAGVVKVYETLTGVKVEGKPQALKKDVVLHSLPPEWPQDPLPDIRRLNEISSKVLIVLDDDPTGTQTVHDIEVLTEWSIESLIEQFRKGPKCFFILTNSRSLSSEKASALIREICRNLATAAKSVDNIDYTEADAAVSVLGEMDAWIICPFFLQGGRYTIEDIHYVADSDNLLPAGDTEFAKDAAFGYKSSNLRNWVEEKTDGRIPASAVESISIQLLRKGGPDAVCQHLCNLKKGSICIVNSASETDMAVFALGMIKAELMKKRFLSRTAASFVSSRIGIISKPPILPKDLGISRQRNGGLIVVGSYVPKTTKQVEELKLQCGQFLRSIEVSVEKLVMQPIEEREEEISKTAQLADVYLKAHKDTLILTSRNLITGKTASESLDINFKVSSALVEIVKRITTKPRYILAKGGITSSDLATKALGAKCAKIVGQALAGIPLWQLGSESRHPGVPYIVFPGNVGDSRSLAEVVRSWTRPTRLSSTKDILNNAEKGGYAVGAFNVYNLEGVEAVVSAAEEEQSPAILQIHPGALKQGGIPLVACCISAAEQASVPITVHFDHGTSKQDLVEALDLGFSSVMVDGSHLSFNENAAYTKFISSLAHSKDILVEAELGRLSGTEDDLTVEEYEAKLTDANLAQKFIDETSIDALAVCIGNVHGKYPASGPKLRFDLLKELHALSLKKGIFLVLHGASGLSKELIKECINLGVRKFNVNTEVRKAYMDSLITPKSDLVHVMASAKDAMKAVVAEKIHLFGSAGRA 1372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0476 1372 TIGRFAM cbbA: ketose-bisphosphate aldolase 1094 1372 IPR000771 GO:0005975|GO:0008270|GO:0016832
Lal8g0476 1372 Gene3D - 493 630 IPR013328 GO:0016491
Lal8g0476 1372 Gene3D - 667 888 IPR037051 -
Lal8g0476 1372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 163 IPR036291 -
Lal8g0476 1372 Gene3D - 906 1087 IPR042213 -
Lal8g0476 1372 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 170 302 IPR008927 -
Lal8g0476 1372 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 494 629 IPR008927 -
Lal8g0476 1372 Pfam Fructose-bisphosphate aldolase class-II 1096 1371 IPR000771 GO:0005975|GO:0008270|GO:0016832
Lal8g0476 1372 Gene3D Aldolase class I 1088 1372 IPR013785 -
Lal8g0476 1372 Gene3D - 324 492 - -
Lal8g0476 1372 Gene3D - 4 168 - -
Lal8g0476 1372 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 7 164 IPR006115 GO:0050661
Lal8g0476 1372 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 330 488 IPR006115 GO:0050661
Lal8g0476 1372 Pfam Sugar-binding N-terminal domain 668 890 IPR010737 -
Lal8g0476 1372 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 293 IPR029154 GO:0051287
Lal8g0476 1372 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 495 621 IPR029154 GO:0051287
Lal8g0476 1372 PANTHER ALDOLASE-RELATED 5 277 - -
Lal8g0476 1372 PANTHER ALDOLASE-RELATED 286 1297 - -
Lal8g0476 1372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 329 487 IPR036291 -
Lal8g0476 1372 SUPERFAMILY YgbK-like 668 1086 - -
Lal8g0476 1372 Pfam Nucleotide-binding C-terminal domain 915 1080 IPR031475 -
Lal8g0476 1372 SUPERFAMILY Aldolase 1096 1372 - -
Lal8g0476 1372 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 333 346 IPR002204 GO:0016491
Lal8g0476 1372 Gene3D - 171 299 IPR013328 GO:0016491
Lal8g0476 1372 CDD TBP_aldolase_IIB 1097 1370 IPR000771 GO:0005975|GO:0008270|GO:0016832
Lal8g0476 1372 PANTHER KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN 5 277 - -
Lal8g0476 1372 PANTHER KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN 286 1297 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0476 - - aip:107617544 2268.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0476 8 3188244 3206539 Lal8g0476 8 3188244 3206539 ECH