Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0470 ATGTCTTCATTTTCTTCATTAACTTATTGTAATATCTTCAAGAACAAGTGCTTTATAATGGGCCTATTCCTTTCTAGGAACCTTGCTTCCAATTTCTTATACCATTTTCTATTTTCTAAGAACTTTCCTGTGGATTTGTTTCCTAAGCAATTGGAGAACATGATGTGTTTGGTTTCTTCTCGTACTGGAAGACATTTGCAACGTTATGATAAAGGGAATCGCCTAGTTGTCGGATGCATTCCTTATAGATACAAGATGAATGGATCCAAGGACAAGGAAATAGAGGTTCTTGTGATTAGTGCTCAGAAAGGTCAAGGAATGCAGTTCCCAAAGGGAGGTTGGGAGATTGATGAATCAATGGAACAAGCTGCTTTAAGAGAGACAGTAGAGGAAGCTGGGGTTGTTGGCAAAGTTGAAAGTAAATTAGGTAAATGGTTTTATAAGAGCAAAAGCCAAGCCATAATCCATGAGGGATATATGTTCCCTTTGCTTGTGAAGAAGCAATTGGATAATTGGCCAGAGATGAACTTCAGAAAAAGGAGATGGATGACTGTGCCTGAGGCAAAAGAAATATGCCCTCATTCTTGGATGAAGGAAGCTTTAGATGTATTGGTTAGTCGACAAACTCAACCGCAGCCAAAGCTATAA 648 0.3873 MSSFSSLTYCNIFKNKCFIMGLFLSRNLASNFLYHFLFSKNFPVDLFPKQLENMMCLVSSRTGRHLQRYDKGNRLVVGCIPYRYKMNGSKDKEIEVLVISAQKGQGMQFPKGGWEIDESMEQAALRETVEEAGVVGKVESKLGKWFYKSKSQAIIHEGYMFPLLVKKQLDNWPEMNFRKRRWMTVPEAKEICPHSWMKEALDVLVSRQTQPQPKL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0470 215 ProSiteProfiles Nudix hydrolase domain profile. 72 205 IPR000086 -
Lal8g0470 215 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 37 210 - -
Lal8g0470 215 Pfam NUDIX domain 92 199 IPR000086 -
Lal8g0470 215 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 58 207 - -
Lal8g0470 215 SUPERFAMILY Nudix 64 206 IPR015797 -
Lal8g0470 215 ProSitePatterns Nudix box signature. 112 133 IPR020084 GO:0016787
Lal8g0470 215 CDD Nudix_Hydrolase_9 75 198 - -
Lal8g0470 215 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 37 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0470 Lal-Chr8 3139431 3141047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0470 K07766 - gmx:100527127 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0470 8 3139431 3141047 Lal8g0470 8 3139431 3141047 ECH