Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0467 ATGGCATCTTTGAGCATAACCCAAATCAGAACTGGGAATTTTGCATCTGGGTTTGGCATGAATTGTGCTAAAAAGGTTCCCACCAGAGTTGGGTTTAAGGTGTTTGCTTCTGAGACTCAGGGTGTTTCTTCAGAACCTGATCTTAGTGTTACTGTGAATGGGTTACACATGCCTAACCCATTTGTTATTGGGTCTGGTCCACCTGGGACCAATTACACTGTCATGAAGAGAGCCTTTGATGAAGGTTGGGGTGCTGTGATTGCTAAAACTGTATCACTTGATGCAGCAAAAGTTATAAATGTAACTCCTCGGTATGCCCGACTAAGGGCACGTGGTACAAATGGCTCTGCCAAAGGAGAAATCATTGGGTGGGAGAACATAGAACTTATCAGTGACCGGCCACTTGAGACCATGTTGAAAGAATTTAAGCAATTAAAAGAAGAGTATCCTGACAGAATTCTCATTGCTTCAATCATGGAGGAGTACAATAAAGATGCTTGGGAGGAGCTTATTGATCGAGTTGAGCAAACTGGAGTTGATGCAATTGAAGTAAATTTCTCTTGTCCTCATGGTATGCCAGAACGCAAAATGGGAGCAGCTGTTGGGCAAGATTGTGCACTTTTGGAAGAGGTTTGTGGATGGTTAAATGCAAAAGCTACAGTTCCTGTTTGGGCTAAGATGACTCCCAACATAACTGATATTTCACAGCCAGCCAGGGTTGCACTAAGTTCAGGATGCGAAGGAGTAGCTGCTATAAATACAATCATGAGTGTCATGGGAATCAATCTCACTACATTACGCCCTGAGCCTTGTGTTGAGGGGTACTCAACTCCGGGGGGTTATTCCGCAAAGGCGGTTCATCCCATCGCACTTGGGAAGGTGATGAGTATTGCAAAAATGATGAAGTCAGAGTTCAATAGTGAGCACTTTACACTTTCTGCCATTGGTGGTGTTGAGACAGGAGGTGATGCTGCTGAATTTATTCTTCTTGGTGCAAATACTGTTCAGGTGTGCACAGGGGTTATGATGCATGGCTATGGTCTTGTAAAGAAACTATGTGCTGAGCTTCAAGACTTCATGAAAAAACACAATTTCACATCAATAGAAGATTTCAGAGGGGTCTCTCTTCAGTACTTTACAACTCATACTGACTTGGTGCAAAGGCAACAAGAGGCGATTCGACAGAGGAAAGCTATAAAGAAAGGTTTGCAATCTGACAAAGACTGGACAGGAGATGGTTTTGTGAAAGAAACTGAAAGCATGGTTTCTAACTGA 1275 0.4314 MASLSITQIRTGNFASGFGMNCAKKVPTRVGFKVFASETQGVSSEPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRARGTNGSAKGEIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKDAWEELIDRVEQTGVDAIEVNFSCPHGMPERKMGAAVGQDCALLEEVCGWLNAKATVPVWAKMTPNITDISQPARVALSSGCEGVAAINTIMSVMGINLTTLRPEPCVEGYSTPGGYSAKAVHPIALGKVMSIAKMMKSEFNSEHFTLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCAELQDFMKKHNFTSIEDFRGVSLQYFTTHTDLVQRQQEAIRQRKAIKKGLQSDKDWTGDGFVKETESMVSN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0467 424 Pfam Dihydroorotate dehydrogenase 48 360 IPR005720 GO:0005737|GO:0016627
Lal8g0467 424 CDD DHPD_FMN 47 356 - -
Lal8g0467 424 PANTHER BNAA01G27800D PROTEIN 26 424 - -
Lal8g0467 424 SUPERFAMILY FMN-linked oxidoreductases 40 376 - -
Lal8g0467 424 Gene3D Aldolase class I 48 366 IPR013785 -
Lal8g0467 424 TIGRFAM pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 48 375 IPR005720 GO:0005737|GO:0016627
Lal8g0467 424 PANTHER DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)] 26 424 IPR044512 GO:0006210|GO:0006212
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0467 Lal-Chr8 3119191 3124089 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0467 K00207 - gmx:100818990 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0467 8 3119191 3124089 Lal8g0467 8 3119191 3124089 ECH