Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0457 ATGGAAAGAGAACACCAAAATGTGTCTCTGAACGTTCCCTTGATTCAAAACTCAGGGCAAGATGGAGTGATAGTTGATGATGTAGAGCAAAACAAGTCAAGTGGGATAGTAGAAAGAACAGAACTCAGTGAAGAAGTGATTAAGCAGTTATGGCTTGCAGGACCTTTGATATCAGTGAGCCTCTTAAATTATTGCTTACAAGTTATATCAGTTATGTTTGTAGGCCATCTTGGAGAGTTGTCTCTTTCTGGTGCTTCCATGGCCACTTCTTTTGCTTCTGTCACTGGTTTCAGTTTATTGATGGGAATGGCAAGTGCTTTAGACACCTTATGTGGCCAGTCATTTGGTGCAAAGCAGCACCGGATGTTAGGCATACAAATGCAGAGAGCAATGTTCATTCTTATGATTGTTAGCATTCCACTTGCAGTTATTTGGGCAAACACAAAATCCATTCTGATTCTCCTTGGCCAAGATCATGAAATAGCTACAGAAGCTGGCAACTATGCACAATTAATGGTTCCAAGCATTTTTGCTTATGCCCTTCTTCAGTGCCTAAACAGATTCTTACAAACCCAAAATCTTGTATTTCCAATGGTCTTGTTTTCTGGAGTGACAACTTTACTACATATTCTTGTATGTTGGTTTATGGTATTCAAATCTGGACTAGGAGGCAGAGGAGCCGCTGTTGCGAATTCTATATCTTATTGGGTTAATGTTGTGCTGCTCACCATCTATGTCAGATTTTCTCCTTCCTGTGCAAAAACTTGGACAGGCTTTTCCAAAGAGGCACTTCAAAACATCCCTCAATTTCTCATGCTTGCCATTCCTTCAGCTGTTATGCAACCTATTGTGGGTTTTTTCAGCTTGAATACATCTGCAGCTGTTTGGATGATCCCTTTTGGACTCAGTGGAGCTGTAAGCACTCGAATCTCAAATGAACTTGGAGCTGGTCATCCGAAAGTTGCACGTTTAGCAGTGGTTGTTGTCTTAATATTGACCTTGGTTTTGGCCATCTTAGTAGGAACCGTGATGATACTAATACGTAACATTTGGGGCTATGCATATAGTAATGAAGTAGAAGTGGTCAAATATGTAGCAACTATGATGCCAATTCTTGCAACATCCAGCTTTTTGGAGGCACTTCAAAGTGTCCTTTCAGGTGTTGCTAGAGGATGTGGATGGCAGAAAATTGGTGCCTTTGTCAATCTGGGTTCATACTACTTAGTTGGGATTCCAGTTTCTATTGTATTTGCTTTTGTTTTGCATATTGGTGGCAAGGCAAAAAAGGCTACGGATAGAGTCTATGATTCAGTAACACCAGATAGCATAGTCTCATGA 1338 0.4066 MEREHQNVSLNVPLIQNSGQDGVIVDDVEQNKSSGIVERTELSEEVIKQLWLAGPLISVSLLNYCLQVISVMFVGHLGELSLSGASMATSFASVTGFSLLMGMASALDTLCGQSFGAKQHRMLGIQMQRAMFILMIVSIPLAVIWANTKSILILLGQDHEIATEAGNYAQLMVPSIFAYALLQCLNRFLQTQNLVFPMVLFSGVTTLLHILVCWFMVFKSGLGGRGAAVANSISYWVNVVLLTIYVRFSPSCAKTWTGFSKEALQNIPQFLMLAIPSAVMQPIVGFFSLNTSAAVWMIPFGLSGAVSTRISNELGAGHPKVARLAVVVVLILTLVLAILVGTVMILIRNIWGYAYSNEVEVVKYVATMMPILATSSFLEALQSVLSGVARGCGWQKIGAFVNLGSYYLVGIPVSIVFAFVLHIGGKAKKATDRVYDSVTPDSIVS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0457 445 Pfam MatE 289 415 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal8g0457 445 Pfam MatE 55 214 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal8g0457 445 PANTHER PROTEIN DETOXIFICATION 26 280 - -
Lal8g0457 445 PANTHER PROTEIN DETOXIFICATION 288 430 - -
Lal8g0457 445 PANTHER MULTIDRUG RESISTANCE PROTEIN 26 280 - -
Lal8g0457 445 PANTHER MULTIDRUG RESISTANCE PROTEIN 288 430 - -
Lal8g0457 445 CDD MATE_eukaryotic 45 426 IPR045069 GO:0042910|GO:1990961
Lal8g0457 445 TIGRFAM matE: MATE efflux family protein 55 284 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0457 Lal-Chr8 3044580 3047827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0457 K03327 - gmx:100792588 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0457 8 3044580 3047827 Lal8g0457 8 3044580 3047827 ECH