Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0419 ATGGCTATGGTTGATCAACCTCTGTATCCGATAGCGGTTCTGATCGATGAGCTGAAGAATGAGGACATTCAGCTTCGCCTCAACTCGATCCGAAGGCTTTCCACCATTGCGCGTGCGCTCGGTGAAGAAAGAACCAGGAAGGAGCTGATTCCTTTTCTCGGTGAGAGCAACGATGACGAGGATGAAGTTCTTCTTGTAATGGCAGAGGAATTAGGTGTGTTTGTTCCTCATGTTGGTGGTGTTGAGCATGCAAGTGTGTTGCTTCCACCATTGGAAACCTTATGCGCTGTTGAGGAAACTTGTGTTAGGGATAAATCTGTTGAGTCTCTGTGTAAAATTGGTGCTCAGATGAGGGAACAGGATTTGGTTGAATACTTTATTCCTTTAGTCAAGAGGCTGGCTGCTGGTGAGTGGTTCACAGCACGGGTTTCTGCATGTGGCTTGTTTCATATTGCTTACCCTAGTGCTTCAGAGGTGATGAAAACTGAATTAAGAACAATATATAGTCAGCTGTGTCAAGATGATATGCCAATGGTTAGGAGATCTGCTGCAACAAACCTGGGAAAGTTTGCTGCTACTGTTGAAGCTGTCCACCGGAAAACCGACATCATGTCTTTATTTGAGGAACTCACACAGGATGATCAAGATTCTGTTCGGCTACTTGCTGTTGAGGGTTGTGCAGCTCTTGGAAAATTGTTGGAGCCTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTCTCTCAGGATAAGTCATGGCGTGTTCGTTACATGGTTGCAAATCAACTATATGAGTTATGTGAAGCTGTTGGTCCTGACCCTACCAGGTCAGAATTGGTTCCTGCATATGTTCGCCTACTGCGTGATAATGAGGCTGAAGTACGTATTGCTGCTGCTGGGAAAGTGACCAAGTTTTCCCACATATTAAGTCCTGAACTTGCTATTCAGCATATTCTACCATGTGTGAAGGAGTTATCAACAGATTCATCTCAACATGTTCGCTCTGCATTGGCTTCAGTTATAATGGGAATGGCACCAGTGCTAGGGAAGGATGCGACGATTGAGCAACTTCTCCCTATTTTCCTTTCTCTTTTGAAAGATGAATTTCCTGATGTCAGGCTAAATATTATCAGCAAGCTTGACCAAGTAAACCAGGTTATTGGCATTGATCTGTTATCTCAGTCTCTATTACCAGCTATTGTTGAGCTTGCTGAGGATCGTCACTGGAGAGTTCGACTTGCTATCATAGAATATATACCCTTATTAGCAAGTCAGCTGGGTGTCGGTTTTTTCGATGACAAGCTTGGAGCACTTTGCATGCAATGGCTAAAGGACAAGGTATACTCTATTCGTGATGCAGCTGCTAATAATGTAAAACGCCTGGCAGAAGAATTTGGACCAGATTGGGCAATGCAGCACATTATCCCTCAGGTTCTGGACATGATTAACGATCCACACTATCTGTATCGGATGACAATTCTACATGCAATTTCTCTTCTAGCTCCTGTTCTGGGCTCTGAGATCACTTCTTCAAAACTTCTCCCTCTGGTCATTAATGCATCAAAAGATAGGGTACCTAATATCAAATTCAACGTAGCTAAAGTCTTGCAGTCTCTCATTCCAATTGTTGATGAGTCTGTTGTTGAGAATAGCATTCGTCCCTGTCTGGTTGAGCTCATTGAGGACCCAGATGTTGATGTTAGGTTTTATGCCTCTCAAGCACTGCAATCCTGTGACCAAGTCAAGATGTCCAACTAG 1764 0.4365 MAMVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLGESNDDEDEVLLVMAEELGVFVPHVGGVEHASVLLPPLETLCAVEETCVRDKSVESLCKIGAQMREQDLVEYFIPLVKRLAAGEWFTARVSACGLFHIAYPSASEVMKTELRTIYSQLCQDDMPMVRRSAATNLGKFAATVEAVHRKTDIMSLFEELTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDPTRSELVPAYVRLLRDNEAEVRIAAAGKVTKFSHILSPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPDWAMQHIIPQVLDMINDPHYLYRMTILHAISLLAPVLGSEITSSKLLPLVINASKDRVPNIKFNVAKVLQSLIPIVDESVVENSIRPCLVELIEDPDVDVRFYASQALQSCDQVKMSN 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0419 587 Pfam HEAT repeats 205 301 - -
Lal8g0419 587 Pfam HEAT repeats 361 459 - -
Lal8g0419 587 ProSiteProfiles HEAT repeat profile. 242 280 IPR021133 -
Lal8g0419 587 ProSiteProfiles HEAT repeat profile. 476 514 IPR021133 -
Lal8g0419 587 ProSiteProfiles HEAT repeat profile. 203 241 IPR021133 -
Lal8g0419 587 SUPERFAMILY ARM repeat 8 579 IPR016024 -
Lal8g0419 587 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 1 586 - -
Lal8g0419 587 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT A 1 586 - -
Lal8g0419 587 ProSiteProfiles HEAT repeat profile. 398 436 IPR021133 -
Lal8g0419 587 ProSiteProfiles HEAT repeat profile. 320 358 IPR021133 -
Lal8g0419 587 Gene3D - 2 580 IPR011989 -
Lal8g0419 587 ProSiteProfiles HEAT repeat profile. 554 587 IPR021133 -
Lal8g0419 587 ProSiteProfiles HEAT repeat profile. 281 319 IPR021133 -
Lal8g0419 587 ProSiteProfiles HEAT repeat profile. 10 48 IPR021133 -
Lal8g0419 587 ProSiteProfiles HEAT repeat profile. 359 397 IPR021133 -
Lal8g0419 587 ProSiteProfiles HEAT repeat profile. 515 553 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0419 Lal-Chr8 2817452 2823940 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0419 K03456 - gmx:100799440 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0419 8 2817452 2823940 Lal8g0419 8 2817452 2823940 ECH
Lal8g0419 8 2817452 2823940 Lal25g0447 25 3075233 3082350 LSH