Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0415 ATGGCTTTGAGTCTCAACCCACCCTTCCTTCTCCTCATAACACTTTCCCTTTCTCTCTTCCAGTTTCCTTCTACCACTTCCTCTAGAATCTCTCCATCACACACCACCACCACTCTTGACATCTCTTCTTCACTTCATCAAACCCACCAAGTTCTCACCTTTAACCCAGACCTTCTACAACCTTCTAAAACCCAAGAAACAAAACCAAACACAACCTTCTTCTCTCTTCACCTACACCCAAGAGAGAGTATCCACACCACACACCACAAAGACTACAAAGCCTTAATCCTCTCCCGACTCGCCCGTGACTCTGCCCGAGTCAACTCGCTCAACACAAAACTCCAACTTGCTCTATACAATCTCTCCAAATCCGATCTCCACCCGACCCAACAAACCATGATCCGACCCGAAGACTTATCCACACCAATCTCATCCGGGTCGAACCAAGGATCCGGCGAGTACTTCACACGCGTCGGTGTGGGCCAGCCCTCCAAACCCTTTTACATGGTCCTCGACACCGGAAGCGACGTGAACTGGCTCCAATGCAAACCCTGCGACGACTGTTACCAACAATCCGACCCGATTTATGACCCGACCCAGTCCACGTCGTTCTACCCGTTACCATGCGATTCTCAACAGTGCCAAGCTCTTGACACGTCAGCATGCAGAAACAATAAGTGCCTCTACCAAGTTTCTTATGGTGATGGTTCTTTCACTGTTGGTGAGTTCATAACCGAAACGATGACGTTTGGTAACTCCGGTTCAGTGAACCGGGTTGCAATCGGGTGCGGGCATGATAATGAAGGTTTATTTGTTGGTGCTGCTGGGCTTTTGGGCCTAGGTGGTGGGCCTTTATCTCTAACTAAACAAATCAAAGCGACGTCGTTTTCGTATTGTTTAGTTGATCGTGACTCGGGAAAATCGTCCACGCTCGAGTTCAACTCACCACGACCTGGTGACTCGGTAACTGCACCGTTGTTGAAGAACCAGAAGGTTGATACGTTTTACTACGTCGAGCTTCAAGGAATCAGCGTTGGCGGCGAAGTGGTTCCCATTCCACCGGAGACTTTCGCGGCAGGGAATTCCGGTGGTGGTGTTATCCTTGATTGCGGAACCGCGATAACTCGATTGCAGACTCAGGCTTATAACTCGGTTCGTGACTCGTTCAAGAAGCTTACTCAGAATCTGCGTTCAGCTGATGGGTTTGCGCTCTTCGACACTTGCTACGATTTCTCGTCTCTGAGTTCGGTAAGGGTTCCGACGATGTCGTTCCATTTTAATGGCGGGAAATCATGGGCGTTGCCGGCGAAGAATTATTTAATTCCGGTGGATTCCGCCGGCACATTTTGCTTTGCTTTTGCGCCGACGAGATCGTCGATGGCAATAATTGGGAATGTGCAGCAACAGGGGACACGTGTCAGTTTTGATCTTGCAAACTCTTTAGTGGGATTCTCACCCAACAAGTGCTAG 1470 0.4946 MALSLNPPFLLLITLSLSLFQFPSTTSSRISPSHTTTTLDISSSLHQTHQVLTFNPDLLQPSKTQETKPNTTFFSLHLHPRESIHTTHHKDYKALILSRLARDSARVNSLNTKLQLALYNLSKSDLHPTQQTMIRPEDLSTPISSGSNQGSGEYFTRVGVGQPSKPFYMVLDTGSDVNWLQCKPCDDCYQQSDPIYDPTQSTSFYPLPCDSQQCQALDTSACRNNKCLYQVSYGDGSFTVGEFITETMTFGNSGSVNRVAIGCGHDNEGLFVGAAGLLGLGGGPLSLTKQIKATSFSYCLVDRDSGKSSTLEFNSPRPGDSVTAPLLKNQKVDTFYYVELQGISVGGEVVPIPPETFAAGNSGGGVILDCGTAITRLQTQAYNSVRDSFKKLTQNLRSADGFALFDTCYDFSSLSSVRVPTMSFHFNGGKSWALPAKNYLIPVDSAGTFCFAFAPTRSSMAIIGNVQQQGTRVSFDLANSLVGFSPNKC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0415 489 ProSiteProfiles Peptidase family A1 domain profile. 154 485 IPR033121 -
Lal8g0415 489 CDD cnd41_like 153 489 IPR033873 -
Lal8g0415 489 PANTHER ASPARTYL PROTEASES 16 489 IPR001461 GO:0004190|GO:0006508
Lal8g0415 489 SUPERFAMILY Acid proteases 147 489 IPR021109 -
Lal8g0415 489 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 169 180 IPR001969 GO:0004190|GO:0006508
Lal8g0415 489 Gene3D Acid Proteases 126 313 IPR021109 -
Lal8g0415 489 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 16 489 - -
Lal8g0415 489 Pfam Xylanase inhibitor N-terminal 154 313 IPR032861 -
Lal8g0415 489 Pfam Xylanase inhibitor C-terminal 336 485 IPR032799 -
Lal8g0415 489 Gene3D Acid Proteases 319 489 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0415 Lal-Chr8 2801283 2802752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0415 117 489 Miscellaneous Gene Families AT1G77480 24.821 1.78e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0415 K22683 - gmx:100784849 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0415 8 2801283 2802752 Lal8g0415 8 2801283 2802752 ECH