Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1387 ATGAACTCCATTGCCTTCAAATCCTTCGTCGGACTCCGCCACTCCTCATCGGAACCACTCCATTTCTCCGCCCAACCCAAACCCATCACTCTCCACCGCAAACTCAAGGTCCTCGCCGGAAAGTACAGTCCCAAGGTCCAAGGTCGCAACCTCCGTGTCGCCATCGTGGGTGGTGGCCCAGCCGGAGGTGCAGCCGCCGAAACATTAGCAAAAGGTGGCATAGAAACTTTCCTAATCGAACGGAAACTCGATAACTGTAAGCCATGCGGGGGAGCCATTCCACTTTGCATGGTTGGAGAGTTCGACCTTCCGTTAGACATCATCGACCGCCGTGTGACGAAGATGAAGATGATATCGCCGTCGAACGTGGCGGTGGATATTGGAAGGACGTTGAAGGCGCATGAATACATAGGAATGGTTCGGCGTGAGGTGCTAGATAATTATTTGAGGGAACGTGCAAAGGAAAACGGTGCTAATATTATAAATGGTCTCTTCTTGAAAATGGATATTCCTAAAGATAAGGAGTCACCGTATGTGTTGCATTACTCAGGATATGATGGTAAAACTAGTGGAGTTGGTGAGAAGCGTACGTTGGAAGTTGATGCTGTAATTGGTGCTGATGGAGCTAACTCCAGAGTTGCTAAGGCTATTGATGCTGGTGACTATGAGTATGCCATTGCATTTCAGGAAAGGATAAAAATTCCAGATGATAAGATGGTGTATTATGAGAATCTTGCGGAGATGTACGTGGGTGATGATGTTTCACCCGATTTCTATGGATGGGTGTTTCCAAAATGTGATCATGTTGCTGTTGGCACTGGTACAGTGACACACAAGGGAGACATCAAGAAGTTCCAATTAGCAACAAGGAAAAGAGCAGAGGATAAGATTCTGGGAGGAAAAATCATTCGAGTGGAGGCACACCCTATCCCAGAACATCCCAGGCCGCGAAGATTGAAAGGGAGAGTGGCACTGGTGGGTGACGCTGCTGGCTATGTCACCAAATGCTCCGGAGAAGGGATATATTTTGCAGCCAAGAGTGGGAGGATGTGTGCAGAGGCGATCGTTGAAGGATCGGAGAATGGGAAGAGGCTAGTGGATGAAGGGGACTTGAGGAAGTACTTGGAGAAGTGGGATAAGGCATATTGGCCAACTTACAAGGTGTTGGATATTCTACAAAAGGTGTTTTATAGGTCCAATCCTGCTAGGGAAGCATTTGTGGAGATGTGTGCTGATGAGTATGTGCAGAAAATGACCTTTGATAGCTATTTATATAAGACAGTTGTACCTGGCAATCCATTGGAGGATCTCAAGTTGGCTATTAACACCATTGGGAGTTTGGTGAGGGCCAATGCTCTTAGGAATGAGATGAACAAACTTAATGTATGA 1389 0.4694 MNSIAFKSFVGLRHSSSEPLHFSAQPKPITLHRKLKVLAGKYSPKVQGRNLRVAIVGGGPAGGAAAETLAKGGIETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGRTLKAHEYIGMVRREVLDNYLRERAKENGANIINGLFLKMDIPKDKESPYVLHYSGYDGKTSGVGEKRTLEVDAVIGADGANSRVAKAIDAGDYEYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKILGGKIIRVEAHPIPEHPRPRRLKGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRLVDEGDLRKYLEKWDKAYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLEDLKLAINTIGSLVRANALRNEMNKLNV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1387 462 TIGRFAM GG-red-SF: geranylgeranyl reductase family 53 355 IPR011777 GO:0016628
Lal7g1387 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 52 74 - -
Lal7g1387 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 199 214 - -
Lal7g1387 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 335 - -
Lal7g1387 462 SUPERFAMILY FAD/NAD(P)-binding domain 51 429 IPR036188 -
Lal7g1387 462 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 223 IPR023753 GO:0016491
Lal7g1387 462 PANTHER GERANYLGERANYL DIPHOSPHATE REDUCTASE 22 461 - -
Lal7g1387 462 PANTHER OS01G0265000 PROTEIN 22 461 - -
Lal7g1387 462 TIGRFAM BchP-ChlP: geranylgeranyl reductase 52 449 IPR010253 GO:0015979|GO:0015995|GO:0045550
Lal7g1387 462 Gene3D - 50 461 IPR036188 -
Lal7g1387 462 TIGRFAM ChlP: geranylgeranyl reductase 51 449 IPR011774 GO:0045550
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1387 Lal-Chr7 18897203 18899636 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1387 K10960 - gmx:100779933 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1387 7 18897203 18899636 Lal7g1387 7 18897203 18899636 ECH
Lal14g1904 14 18403702 18405843 Lal7g1387 7 18897203 18899636 LSH
Lal7g1387 7 18897203 18899636 Lal19g1475 19 17240651 17242991 LSH