Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1334 ATGTGCAGGGTGAATAATAAAAAGAGGGAGATCAATAATAATAATAATAAGAGTAAGTTTGAAGAATTAAGGTTGATGGGTTTGAAGAGGGTAGAAAGTAAGGTTGAGAAGTTGAGGAATAGCATAGGTGCTTCATCTTCTTCAAGGTCTCGGATGAAGCTGTGGATGATACGCGCCACCACATCGATATTGCTATGGACTTGTATAGTTCAATTAACAGCATTGGGTGACATGTGGGGTCCTAGAGTATTGAAAGGATGGCCTTCTTGTTTTACTCATGATTCTCACTTTCCCACTCACCCTCCTCTTCTTCTTCCTCCCAAGAGAGTTTATAGAAACAATGGATACCTCATGATCTCGTGCAATGGAGGACTAAATCAAATGAGAGCAGCGATATGTGACATGGTAGCCATTGCAAGATACTTAAATGTCACACTTATTGTCCCTGAACTGGATAAAGCTTCCTTTTGGGCTGATCCAAGTGAGTTCCAAGACATATTTGATGTGGATCATTTTATTGCATCCTTGAGAGATGAAGTGCGCATATTGAAAGAGTTACCTCCAAGACTCAAGCTCAGAGTGGAGAATGGGCCACTTTACACTATGCCACCTATTAGTTGGTCTGACATATCTTACTATCAGGACCAGATTCTGCCCTTGATACGAAAGTACAAAGTTGTCCATTTAAATCGAACTGACGCTCGTCTGGCCAATAACAATCAACCTCTTGAGATTCAGAAGTTGCGCTGCCGAGTTAATTTCAGTGCTCTGAGATTTACTCCTCAGATAGAGGAGTTGGGCAGAAAGGTGACCAAGCTTCTAAGGCAAAATGGTCCCTTTCTGGTACTTCATCTGAGGTATGAGATGGACATGCTGGCATTTTCTGGATGTACACAAGGTTGCAACGCTGAAGAGGTAGAAGAGTTGACAAGGATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCGGATATGAAAAGAAAATATGGCTTATGTCCTTTGACACCTGAGGAGACTGCCCTTACGCTTAAGGCTCTAGACATTGATCAGAACATTCAAATTTACATTGCAGCTGGGGAGATATACGGTGGCCACAGGAGGATGGCAAGTCTTGCTAAGGATTACCCGAAAGTGGTAAAGTTTAAAGCTCAAGGAGTAAGGAAGGAAACACTGTTGGAACCATCTGACCTTCAATTCTTCCAAAATCACTCATCTCAGATGGCAGCATTGGACTATCTTGTCTCATTAGAGAGTGATATCTTTGCCCCCACATATGATGGAAACATGGCCAAAGTAGTTGAGGGTCATCGCAGATATCTTGGGTACAGGAAGACGATTTTATTGCATCGAAAACTTCTAGTGGATTTGATTGATCAGTACAACAATGGAATACTGAACTGGGATGAATTCTCTTTGGCCGTGAAGGAAGCTCATGCTGACCGCATGGGTAACCCAACAAAGAGGTTGGTAATCCCGGAAAGGCCGAAAGAAGAGGACTACTTCTATGCCAACCCAGAGGAGTGTTTAGAAACATCACCAGATCTTCCATTGAGTAACACATGA 1572 0.4211 MCRVNNKKREINNNNNKSKFEELRLMGLKRVESKVEKLRNSIGASSSSRSRMKLWMIRATTSILLWTCIVQLTALGDMWGPRVLKGWPSCFTHDSHFPTHPPLLLPPKRVYRNNGYLMISCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKASFWADPSEFQDIFDVDHFIASLRDEVRILKELPPRLKLRVENGPLYTMPPISWSDISYYQDQILPLIRKYKVVHLNRTDARLANNNQPLEIQKLRCRVNFSALRFTPQIEELGRKVTKLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNAEEVEELTRMRYAYPWWKEKIINSDMKRKYGLCPLTPEETALTLKALDIDQNIQIYIAAGEIYGGHRRMASLAKDYPKVVKFKAQGVRKETLLEPSDLQFFQNHSSQMAALDYLVSLESDIFAPTYDGNMAKVVEGHRRYLGYRKTILLHRKLLVDLIDQYNNGILNWDEFSLAVKEAHADRMGNPTKRLVIPERPKEEDYFYANPEECLETSPDLPLSNT 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1334 523 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 36 516 - -
Lal7g1334 523 PANTHER OS02G0726500 PROTEIN-RELATED 36 516 - -
Lal7g1334 523 PIRSF UCP009360 13 509 IPR024709 -
Lal7g1334 523 Pfam GDP-fucose protein O-fucosyltransferase 116 443 IPR019378 -
Lal7g1334 523 CDD O-FucT_plant 116 448 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1334 Lal-Chr7 18556378 18559968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1334 112 512 Miscellaneous Gene Families AT2G37980 49.132 1.03e-127 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1334 K23280 - gmx:100814267 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1334 7 18556378 18559968 Lal7g1334 7 18556378 18559968 ECH