Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1310 ATGGAGTGGGGTGGTAATAACAGTAACCACTATAGAACTGCTTACAAAGCAAGACCAGCTTCTGAAGTTCAAGTTGTTGTTATTGTTAATATTTCTGACGACCATAAATCCGTGATGGAGGTTGCACTCATTTCAAATATAGAGCCAGTGAATATTGGCTTGGGTTGTTCAGAAACGCCGGTTCCTATCACTTCACTGAAGCCAAGAAAGAAAACAATGACATCTGTTTATCTGAAGTACTTTGAGACAGCCACAGATGGGAAGACTCGGAGATGTAAGTTTTGTGGACAGAGCTATTCTATTGCAACTGCCACAGGTAATTTGGGGAGGCATCTTGGTAATCGCCATCCAGGTTATGATAAGTCAGGGGATGCTGTTAGCAATTCAGCAACCCGGCCTATTGCTGTGGTCAAGAAGTCTCAGGCTCAAGGAAAACCAAACCAGGTTGATTATGATTATCTAAATTGGTTGCTCATTAGGTGGCTTGTTTCGGCTTCTCTTTCCCCTTCAACTCTTGAAGAGGATTGGCTTGTAAATTCCTACAAGTTTCTAAATCCATCTATACAACTCTGGCCAAGTGACAAGTATAGAACTGTACTTGATGAAGTTTTCAGAAGCATGAGGGAAGATGTAAGAGCATTGTTAGAACAGGTTTCTTCTAAGTTATCCATCATACTTGATTTATGGACTTCCTTTGAAGAGATCTTCTATATGAGTGTAACATGTCAGTGGATTGACGAAAACTGGTGCTTGCAGAAAATGCTTCTTGATATTTGTCGCATACCCTATCCTTGTGGGGGTGCAGAGATCTATCGGTCCCTTGTAGAAGTTCTCAAATATTACAATATTGGAAACAGAGTCCTCTCCTTTACCCATGATAATAGTTCAAATGCCATGCATGCTTGCCATACATTGAATGAAGACTTTGTTGGTCAGAAAATAGGGCCATTCTGTTATATTCCTTGCGCTGCTCGAACTTTGAACTTGATAATAGAAGATGGATTGAGATCAGCAAAACAAGTAATTTCTAAGATCAGGGAGTTTGTAATAGAGTTAAATGCCTCACCAGTGATATCTGAAGATTTTATTCATATATCTTCAGCTTATCAAGAAGGTACTTGGAAATTTCCTCTTGATGTTTCAACTAGGTGGAGTGGAAGCTACCAGATGCTTGATCTTGTTTGCAAGGCAGGTAAATCAATGGATGCTGTTGCTCGTAAATATGACGAATTGCTAGGAAGTAGAATGCTGCTGCTGAGCTCTTCAGACAAAAGTGTGGTTAACATCATGCATCAATATCTTGAACCATTCTACAAGACAACAAACAACATATGCACAAGTAAGGTGCCAACAGTTGGGCTTGTCCTTTTCTTCATGGATCACATCTCCGAAACAATTGCTACCTGCAGAGAATCACGGCAAAGCCCAGAATGGCTAAAAGTTGCTGCAGAAGAAATGGCTAAAAGGGCCAGAAATTATATTAATCAGGTTTGCAACATATTTACTTACATGACAGCAATTCTTGATCCTAGAATCAAGGGAGAACTGATCCCTGAGAGTTTAAACTCAGAAAATTTTCTTGATGAAGCAAGGACCCATTTTTTAAGAAATTATTCTACCACACATTGCCCATCCCTGAGCTCTGGATACAATGCTCAAGAAATTGAAGATGGAAGAAGCGTTTCCTTCGCAGAGGAAATAGCTCGCAAGAAACGAAGGACAAGCACGAGTATTGCAACTGATGAGCTTACACAGTACCTGTCAGAGCCCCCAGCCCCTATACCAATAGATGTTCTAGAGTGGTGGAAGGTGAATAGCACACGCTATCCACGGCTATCAGTGATGGCTAGAGATTTCCTTGCTATGCAAGCAACTTCGGTTGTGCCGGAAGAACTTTTCTGTGGAAAGGGTGATGAAATTAACAAGCAACGATTCTGCATGCCACATGATAGCACACAACCTATTTTTTGTATCAAGTCATGGATCCAAGTTGGCATCAAATTTAAGTCCAAATCTCATGAGATAGATTATGAGAGGTTGATGGAACTGGCAGCTGCAGCAGCTGCAACTGATAATAGCCCCATGAGTTCTGACAAGAAGCAAAAATAA 2109 0.4078 MEWGGNNSNHYRTAYKARPASEVQVVVIVNISDDHKSVMEVALISNIEPVNIGLGCSETPVPITSLKPRKKTMTSVYLKYFETATDGKTRRCKFCGQSYSIATATGNLGRHLGNRHPGYDKSGDAVSNSATRPIAVVKKSQAQGKPNQVDYDYLNWLLIRWLVSASLSPSTLEEDWLVNSYKFLNPSIQLWPSDKYRTVLDEVFRSMREDVRALLEQVSSKLSIILDLWTSFEEIFYMSVTCQWIDENWCLQKMLLDICRIPYPCGGAEIYRSLVEVLKYYNIGNRVLSFTHDNSSNAMHACHTLNEDFVGQKIGPFCYIPCAARTLNLIIEDGLRSAKQVISKIREFVIELNASPVISEDFIHISSAYQEGTWKFPLDVSTRWSGSYQMLDLVCKAGKSMDAVARKYDELLGSRMLLLSSSDKSVVNIMHQYLEPFYKTTNNICTSKVPTVGLVLFFMDHISETIATCRESRQSPEWLKVAAEEMAKRARNYINQVCNIFTYMTAILDPRIKGELIPESLNSENFLDEARTHFLRNYSTTHCPSLSSGYNAQEIEDGRSVSFAEEIARKKRRTSTSIATDELTQYLSEPPAPIPIDVLEWWKVNSTRYPRLSVMARDFLAMQATSVVPEELFCGKGDEINKQRFCMPHDSTQPIFCIKSWIQVGIKFKSKSHEIDYERLMELAAAAAATDNSPMSSDKKQK 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1310 702 Pfam BED zinc finger 75 117 IPR003656 GO:0003677
Lal7g1310 702 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 50 672 - -
Lal7g1310 702 Pfam Domain of unknown function (DUF4413) 445 524 IPR025525 GO:0003677
Lal7g1310 702 PANTHER BED FINGER-RELATED 50 672 IPR045259 -
Lal7g1310 702 SUPERFAMILY Ribonuclease H-like 208 664 IPR012337 -
Lal7g1310 702 Pfam hAT family C-terminal dimerisation region 582 662 IPR008906 GO:0046983
Lal7g1310 702 SMART bed5 72 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1310 Lal-Chr7 18449656 18454336 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1310 - - ahf:112708868 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1310 7 18449656 18454336 Lal7g1310 7 18449656 18454336 ECH